Gene Information

Name : EPYR_01181 (EPYR_01181)
Accession : YP_005801932.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Unknown
Product : protein rhsB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1272774 - 1277060 bp
Length : 4287 bp
Strand : -
Note : HNH endonuclease

DNA sequence :
ATGAGTGAAGCCGCACGCGTTGGCGATGCCACCGGCCATTCCTCCGCGCTGGCCGGGATGANNNNNNNNNNNNNNGTCGG
CGGGCTGATTGCCGCCGCCGGTGCCGTGGCCGCCGGTGCGCTGTTTGTCGCCGGGCTGGCCTCGGCCTGTCTCGGCGTTG
GCGTGCTGCTGATGGGTGCCAGCCTGGCGGTGGGTTATCTCACCGGGGAGGCGGCCACGGCGGCGCGCGACGGCATGGCC
GCCGCCGGGGCAGCCAGCCTGTCCGCTTCGGGGCAGATACTGACCGGCTCGCCGGACGTGTTTATCAACNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCGATAAGGACGGGCCGTCGATGCAGATGGCGCAAGGCTCCGACCGGGTGT
TTATCAACGGCCAGCCCGCTTCCCGCGTCGGCGACAAAACCAACTGCGGTGCCACGGTGATGGCCGGCTCGCCCAGCGTG
CACATCGGCGGCGGCACCGCCACCACGCTGGCGATAAAACCCGAAGTGCCGGAGTGGGCCTNCAAGGCCTCTGACCTGAC
GCTGCTGTTTACCGGGCTGCTCGGCGGTGCCGGCGGCGCGGCCGGTAAGGCTGGCAGGCTGGGTAAACTGCTGAGCAGGC
TGCCCGGCATCAGTAAGCTTGCGCAGGTGGCCTGCCGCTTCGGCACCCTGATGACCGCCAGCGCCGCAGCGGGCATCATC
GCCCGCCCGGTGGATATCATCAGCGGGCAGAANTTTCTCTCCGGCGACGACGAGCTGGACTTCGTGCTGCCCTCACGTCT
GCCGGTCGAATGGCAGCGCTACTGGCGCAGCGGCAACCCGGCGGAAAGCGTGCTGGGGCGCGGCTGGAGCCTGTTCTGGG
AAAGCCGCCTGCAGCATTATGATGACGGCCTGGTGTGGCGCGCGCCGTCCGGTGACTTTGTCCCGTTCCCGATGGTGCCA
CGCGGCCGCAAAAGCTGGTGCGAAGCGGAAAAATGCTGGCTGATGCACAATGCCGACGGCAGCTGGCAGGTGTCCGACGT
CAGTGAACAGGTCTGGCACTATCCGCCGCCCGAGGGTAAGCATCCCGCCCGGCTGCACATGCTGACGGACGCCGGCGGNA
ACGCCACCTCGCTGTTTTACGATGAGCAGGGACGGCTGAGCGAACTGGTGGACAGCGCCGGTCAGCGCCTGAGCTGCCGC
TATCTGACCCGCGCCGCCGGGCATGACCGCCTGAGCGCGGTGCTGCTGCACACCCCGGACGGGGAGNGCACGCTGGTCAG
CTACGATTATGACGACGAGGGGCAGCTTGTCACCGTGCGCAACCGCGCCGGCGAGGTGACGCGCCGCTTCAGCTGGCGCG
ACGGGCTGATGGCCAGCCACCAGGACGCCAACGGGCTGCTGAACGAATATCTGTGGCAGGAGATTGACGGCCTGCCGCGC
GTCACCGGCTGGCGGCACAGCGCCGGGGAAGAGCTGGCGCTGCACTACGACTTTAGCGGCGGCACGCGCCGGGCGGTGCG
CGACGACGGCATGCAGGCGTGGTGGCAGCTGGACGACGACGACAGCGTGGCGCAGTTCACCGACTTTGACGGCCGCCGGC
TGGCGTTTGTCTACGCCCGCGGCGAGCTGTGCAGCGTGCTGCTGCCGGACGGCGGCCAGCGTCAGAGCGAGTGGGACCGC
TACGGGCGACTGCTGAGCGAAACCGACCCGACCGGGCGCAAAACCCTTTACCAGTACCAGCGTAACAGCGACCGGCTGGT
CTGTGTCACCCACCCCGACGGCAGCCGCGAGAGCCGGTCATGGGACCGCCAGGGGCGCCTGATTAAACAGACTGACGCGG
CAGAAAACACCACGCTTTACCACTACCCGGACGAAGAAGAGAGCCTGCCGGCGCGCATCACCGANGCCTCCGGCGGCGTG
GTGCAGCTTGAGTGGAACGGCCGGGGGCTGCTGACGCGCCATACCGACTGTTCCGGCAGCGTCACCGCCTATGGCTATGA
CGTTTTCGGCCAGCTCACCGACCGTACCGATGCGGAAGGCAACGTGACCCGCTACCGCCGGGATGCCGCCGGTCGCCTGC
ACACCCTGCACCACGCGGACGGCAGCGAAGAGCATTTCACCTGGAACGAACGCGGGCAGCTGGTGCGGCATCAGGANCCG
CCCGGCAGCGAGACGCACTGGCGCTACAACCTGCTGGGCCAGCCGGTCAGCATCACCGACCGCATCAACCGCACGCGAAA
CTGGCACTACAACCCGCGCGGCTGGCTGACGCGGCTGGAGAACGGCAACGGCGGCGAGTATCANTTCAGCCACGATGCCG
CCGGGCGCATCACCGCCGAACGGCGTCCGGACAACACCGACCACCTGTACCGCTACGGCCCGGACGGCCAGCTGGCCGAA
CACCGGGAAACCGGCCCGCAGAACAGCCTTGCGCCGCCCGCGCACCGCCTGCACCGCTTCCGCTTTGACGGGGCGGGTCG
CCCGGCATGGCGCGGCAACGACAGCGCCGAATGGCAGTATCACTACGATGCCGCCGGCAGGCTGAGCCNGCTCACGCGTA
CCCCCACCGCCGCCGGGGCGGAGGCGGGGATTGAAGCGGACCGCATTGAGCTGCAGTACGACCGGGCGGGCAACCTGCTG
TGCGAGCGCGGCGTGAACGGCGGGCTGCACTACCAGTGGGACGCGCTGNCTAACCTGCAGGCGCTGACGCTGCCGCAGGG
CGACAGCCTGCAGTGGCTGCACTACGGCTCCGGCCACGTCAGCGCGCTGAAGTTCAACCGGCAGCGGGTCAGTGAATTTA
CCCGTGACCGCCTGCACCGCGAAACCGGGCGCAGCCAGGGCGCGCTGCACCAGCAGCGGCGCTACGATGCGCTGGGCAGG
CGCAGCTGGCAGAGCAGCGCCTTCAGTGACGGGAAGATAACCCGGCCGGAGGACGGTATTCTGTGGCGGGCNTTCCGCTA
TACCGGGCGCGGCGAGCTGGCGGGCNTCAGCGATGCGCTGCGCGGCGAGGTGCACTACGGCTACGACGCCGAAGGCCGNC
TGTTGCAGCACCGCGAGCTGAAGTCCGGCAGGGTTGGCAACCGGCTGCTGTATGACGCCGCCGATAACCTGCTGGGCGGG
CAAAGCCCGCACGACGACCCGGNACAGCCGCCGCCGCCGCCGCTGAGCAGCAACCGCCTGCCGCACTGGCAGCGGCTGTT
CTACCGCTACGACGTCTGGGGCAATCTGGTCAGCCGCCGCCACGGCGTCAACGAACAGCATTACACCTACGACGCCGACA
ACCGCCTGATACNCGCGCGCGGCTTCGGTCCGCAGGGCGAATTCAGCGCGCGGTATCACTATGACGCGCTGGGCAGGCGC
AGCCGCAAGGAGGTCACCTTCGCGGCTAAAGCGCCGCAGACCACGCGCTTCCTGTGGCAGGGCTACCGGCTGCTGCAGGA
GCAGCGCGGCAACGGCACGCGCCGCACCTGGAGCTACGACCCGGCCAGCCCGTGGACGCCGCTGGCGGCCATCGAACAGG
CGGGTGACGCTGAGCAGGCCGATATTTACTGGCTGAACGCCGACCTCAACAGCGCGCCGCTGGAGGTCACCGACGCANNN
GNCAATCTGCGCTGGTCGGGACANTACGACACCTTCGGCAAACTGCTGGGCCAGACGGTCGCCGGGGCAGCACAGCGCAC
CGGGCCGGTCTATGACCAGCCGCTGCGCTACGCCGGGCAGTACCAGGACAACGAGAGCGGACTGCACTATAATCTGTTCC
GTTTTTACGAGCCTGATGTAGGAAGATTCACGACCCAGGACCCGGTGGGGCTGGCGGGAGGGATGAACCTGTATGCTTAT
GCGCCGAATCCGTATGGGTGGGTTGATCCGCTGGGGTTAAGTAAGTGTGCACTGGAAGGAAAATATAAAGAAGTCGATAA
GGCTAATTTACCTGATTGGATTAAAGATTCTTTCAAGAATGGCGAATATAAAACGGTAAGAACAACTGATGAAGTGAATT
TATATCGTGTGTTCGGTGGTAATGCGAAAATAGACGGATCATTTGTTAGTACATCACCAGCGTTGAATAAAATACAAGCC
AAAATTGATTCGGCACTTTTACCAGAATGGAAAAATACGCGACAGTTTGAAGCTACTATTACTGTACCTAAAGGAACAAT
CCTTCAGGTCGGCAAGGTTGAACAGCAAGTTATGCTCTCTGGTGCAAAACTCCAGGGAGGGGCTGACCAAATATTGTTAC
CACATGGCTATCCTACAAGTTGGATAAGTGATGTCAGATTTTTATAA

Protein sequence :
MSEAARVGDATGHSSALAGMXXXXXVGGLIAAAGAVAAGALFVAGLASACLGVGVLLMGASLAVGYLTGEAATAARDGMA
AAGAASLSASGQILTGSPDVFINXXXXXXXXXXXXXCDKDGPSMQMAQGSDRVFINGQPASRVGDKTNCGATVMAGSPSV
HIGGGTATTLAIKPEVPEWAXKASDLTLLFTGLLGGAGGAAGKAGRLGKLLSRLPGISKLAQVACRFGTLMTASAAAGII
ARPVDIISGQXFLSGDDELDFVLPSRLPVEWQRYWRSGNPAESVLGRGWSLFWESRLQHYDDGLVWRAPSGDFVPFPMVP
RGRKSWCEAEKCWLMHNADGSWQVSDVSEQVWHYPPPEGKHPARLHMLTDAGGNATSLFYDEQGRLSELVDSAGQRLSCR
YLTRAAGHDRLSAVLLHTPDGEXTLVSYDYDDEGQLVTVRNRAGEVTRRFSWRDGLMASHQDANGLLNEYLWQEIDGLPR
VTGWRHSAGEELALHYDFSGGTRRAVRDDGMQAWWQLDDDDSVAQFTDFDGRRLAFVYARGELCSVLLPDGGQRQSEWDR
YGRLLSETDPTGRKTLYQYQRNSDRLVCVTHPDGSRESRSWDRQGRLIKQTDAAENTTLYHYPDEEESLPARITXASGGV
VQLEWNGRGLLTRHTDCSGSVTAYGYDVFGQLTDRTDAEGNVTRYRRDAAGRLHTLHHADGSEEHFTWNERGQLVRHQXP
PGSETHWRYNLLGQPVSITDRINRTRNWHYNPRGWLTRLENGNGGEYXFSHDAAGRITAERRPDNTDHLYRYGPDGQLAE
HRETGPQNSLAPPAHRLHRFRFDGAGRPAWRGNDSAEWQYHYDAAGRLSXLTRTPTAAGAEAGIEADRIELQYDRAGNLL
CERGVNGGLHYQWDALXNLQALTLPQGDSLQWLHYGSGHVSALKFNRQRVSEFTRDRLHRETGRSQGALHQQRRYDALGR
RSWQSSAFSDGKITRPEDGILWRAFRYTGRGELAGXSDALRGEVHYGYDAEGRLLQHRELKSGRVGNRLLYDAADNLLGG
QSPHDDPXQPPPPPLSSNRLPHWQRLFYRYDVWGNLVSRRHGVNEQHYTYDADNRLIXARGFGPQGEFSARYHYDALGRR
SRKEVTFAAKAPQTTRFLWQGYRLLQEQRGNGTRRTWSYDPASPWTPLAAIEQAGDAEQADIYWLNADLNSAPLEVTDAX
XNLRWSGXYDTFGKLLGQTVAGAAQRTGPVYDQPLRYAGQYQDNESGLHYNLFRFYEPDVGRFTTQDPVGLAGGMNLYAY
APNPYGWVDPLGLSKCALEGKYKEVDKANLPDWIKDSFKNGEYKTVRTTDEVNLYRVFGGNAKIDGSFVSTSPALNKIQA
KIDSALLPEWKNTRQFEATITVPKGTILQVGKVEQQVMLSGAKLQGGADQILLPHGYPTSWISDVRFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3692 YP_001402646.1 RHS/YD repeat-containing protein Not tested YAPI Protein 0.0 46
api89 CAF28563.1 putative membrane-bound sugar-binding protein Not tested YAPI Protein 0.0 45