Gene Information

Name : smpB (EPYR_01041)
Accession : YP_005801792.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Unknown
Product : SsrA-binding protein (Small protein B)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1131681 - 1132202 bp
Length : 522 bp
Strand : -
Note : SmpB protein, SmpB protein, smpB: SsrA-binding protein

DNA sequence :
ATGCCATTAATCACCGCTTCATGTACACTAACGGGCACTATGACAAAGAAAAAAGCACATAAACCCGGTTCCGCTACCAT
TGCCATGAATAAGCGCGCCCGCCACGAATACTTTATTGAAGAAGAGTTCGAAGCCGGGCTTTCGCTACAGGGATGGGAAG
TTAAATCTCTCCGTGCCGGCAAGGCCAACATCAGCGACAGCTATATCCTGCTACGCGATGGCGAAGCCTTCCTGTTCGGT
TCCACCTTCCAGCCGCTGAGCGTTGCGTCATCACACATTGTGTGCGACCCAACCCGCAGCCGTAAGCTGCTTTTAAAGCA
GCGTGAACTGGATACGCTATTCGGCAAGGCCAACCGTGATGGCTATACCATTGTAGCGCTATCGATGTACTGGAAAAATG
CCTGGGCCAAGCTGAAGATCGGCGTGGCGAAAGGTAAGAAAGAGCACGACAAGCGCGATGATATTAAAGATCGCGAATGG
AAATTAGACAAAGCACGTATTATGAAGCACGCCAACCGCTAA

Protein sequence :
MPLITASCTLTGTMTKKKAHKPGSATIAMNKRARHEYFIEEEFEAGLSLQGWEVKSLRAGKANISDSYILLRDGEAFLFG
STFQPLSVASSHIVCDPTRSRKLLLKQRELDTLFGKANRDGYTIVALSMYWKNAWAKLKIGVAKGKKEHDKRDDIKDREW
KLDKARIMKHANR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 6e-50 66
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 4e-23 45
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-18 43