Gene Information

Name : fliP (EPYR_00994)
Accession : YP_005801745.1
Strain : Erwinia pyrifoliae DSM 12163
Genome accession: NC_017390
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1086613 - 1087356 bp
Length : 744 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGCACCGTACCTTGCTGCGCGCGCTGTTGCTGGTCGCGGGCATGCTGTCTGCCGTTGGCGCGTTGGCGGCCAACAG
CGACATCACCCTGGCCAGCCCGCAGGGCAATGGCGGCTGGACTTTGCCGGTGCAAACGCTGGTACTGCTTAGCTCGCTGA
CCTTTTTACCCGCAGTATTACTGATGATGACCGGTTTTACCCGCATCATTATTGTGCTGGGGCTGATGCGCAATGCCCTC
GGCACGCCAACGGCTCCGCCCAATCAGGTGCTGGTTGGTCTGGCGCTGTTCCTCACCTTCTACGTGATGTCGCCGGTATT
CAATCAGATATACCAGCAGGCCTGGCAGCCACTGCAGGAAGACAAAATCACCATGGAAGTCGCTCTGGAGCAGGGCGTAA
AGCCGCTGCGTGCCTTTATGCTGGATCAGACGCGGGAAAATGATTTGGCGATGTTTGCGCAAATTGCCAAAGCCGGTGAA
TTTAAAGGCCCGGAAGAGGTGCCGCTCGGCATTCTGGTGCCGGCCTTTGTCACCAGCGAACTGAAAACCGCCTTCCAGAT
TGGTTTTACTATCTTTATTCCGTTTCTGATTATCGACCTGGTGGTCGCCAGTATCTTGATGGCGCTCGGGATGATGATGG
TGCCTCCGGCGACCATCGCCTTGCCTTTCAAACTGATGCTGTTCGTGCTGGTTGACGGCTGGCAGCTGCTGATGGGTTCG
CTGGCACAGAGCTTCTACAGTTAG

Protein sequence : 
MKHRTLLRALLLVAGMLSAVGALAANSDITLASPQGNGGWTLPVQTLVLLSSLTFLPAVLLMMTGFTRIIIVLGLMRNAL
GTPTAPPNQVLVGLALFLTFYVMSPVFNQIYQQAWQPLQEDKITMEVALEQGVKPLRAFMLDQTRENDLAMFAQIAKAGE
FKGPEEVPLGILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASILMALGMMMVPPATIALPFKLMLFVLVDGWQLLMGS
LAQSFYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-28 46
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-28 46
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-28 46
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-29 44
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-22 43
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-22 43
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 1e-30 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-31 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 1e-31 42
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 1e-31 42
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 9e-22 41
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 9e-22 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-30 41
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-31 41
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-31 41
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-31 41
hrcR AAB06005.2 HrcR Virulence Hrp PAI Protein 9e-30 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 6e-31 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 7e-30 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 7e-30 41
lscR AAO18040.1 LscR Virulence TTSS locus Protein 9e-32 41
escR AAK26700.1 EscR Virulence LEE Protein 3e-29 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 3e-29 41
escR AAL57527.1 EscR Virulence LEE Protein 3e-29 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 3e-29 41
escR CAC81847.1 EscR protein Virulence LEE II Protein 3e-29 41
escR CAI43889.1 EscR protein Virulence LEE Protein 3e-29 41
escR AAC38369.1 EscR Virulence LEE Protein 2e-28 41
escR AAC31528.1 L0049 Virulence LEE Protein 3e-29 41
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 1e-28 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 3e-29 41
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 4e-29 41
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 4e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_005801745.1 flagellar biosynthetic protein FliP VFG2338 Protein 2e-78 74
fliP YP_005801745.1 flagellar biosynthetic protein FliP VFG2494 Protein 3e-72 68
fliP YP_005801745.1 flagellar biosynthetic protein FliP VFG1259 Protein 2e-62 57
fliP YP_005801745.1 flagellar biosynthetic protein FliP VFG2016 Protein 4e-59 55
fliP YP_005801745.1 flagellar biosynthetic protein FliP VFG0044 Protein 1e-33 43
fliP YP_005801745.1 flagellar biosynthetic protein FliP VFG0394 Protein 2e-33 43
fliP YP_005801745.1 flagellar biosynthetic protein FliP VFG0188 Protein 6e-34 42
fliP YP_005801745.1 flagellar biosynthetic protein FliP VFG0827 Protein 1e-29 41
fliP YP_005801745.1 flagellar biosynthetic protein FliP VFG0715 Protein 1e-28 41