Gene Information

Name : ABTW07_0411 (ABTW07_0411)
Accession : YP_005797307.1
Strain : Acinetobacter baumannii TCDC-AB0715
Genome accession: NC_017387
Putative virulence/resistance : Virulence
Product : Type II secretory pathway, component PulF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 457199 - 458404 bp
Length : 1206 bp
Strand : +
Note : -

DNA sequence :
ATGCCTGCATATCAATTTACTGCTATTGATGCTTCAGGGAAGCAGCAAAAGGGGGTGCTTGAAGGAGACTCGGCACGTCA
GATTCGCCAACAATTACGCGATAAAGCATGGACTCCGATTAGCGTTGACCCGGTTGAACAAAAAGATAAGCATCAAAGCC
ACGGATTATTCCAAAAAAAGTTTAGTGCTTACGATTTAGCACTGATGACCAGACAGCTTTCAGTTTTGGTTGCTGCTGCA
ATTCCTTTAGAAGAAGCTCTCCGCGCCGTGAGCAGACAAAGTGAAAAAGCACATGTGCAAAATCTTTTACTCTCAGTTCG
TTCAAAAGTATTGGAAGGGCATTCACTCGCACAAGGTATGCAACAGTCAGGGCGTTTTCCTGACCTTTATATTGCTACTG
TTGCTGCAGGTGAGCGTTCAGGACACTTAGATCTCATTTTAGATCAGCTATCAGACTACACCGAGAACCGTTTTGCCATG
CAAAAGAAAGTTCAAGGTGCCATGATTTACCCAATCATTTTAATGCTGATGTCTTTCGGTATTGTGATGGGATTAATGAC
TTATGTGGTCCCAGAGATCGTAAAAACCTTCGATCAAAGCAAAGATGCCTTACCATGGATTACAGTTGCTTTAATGAAAG
CGAGTGATTTTATCCGTCATGCATGGGTATTTATTATTCTTTTTGCAATTGTAGGGGTGGTAGCTTTTGTCCGTTTTTTA
AAAACTACTGCGGGACATTATGCTTTTGATCGATTAACACTCAAATTGCCATTATTCGGTAAACTATCCCGTGGTATTAA
TGCTGCGCGCTTTGCCAGTACTTTATCTATTTTGACTCGTTCAGGCGTGCCATTGGTAGATGCCTTAAAGATTGGTGCTG
CTGTGACCAATAACTGGGTTATCCGTGATTCAATTTCCCAAGCGGCTGAGCGTGTTACCGAAGGCGGTAACCTCGGTACG
CAACTGGAGCGCAGTGGTTATTTCCCACCAATGATGGTACAAATGATTCGAAGTGGTGAGGCATCAGGTGAGCTTGACCG
TATGCTTGAACGTGCGTCGACCATGCAAGACCGCGAGGTGACGACATTTATCTCAACCTTATTAGCATTACTTGAACCGC
TAATGCTAGTTTTAATGGCAAGCATCGTACTGGTTATTGTAATTGCGGTTATGCTGCCAATCGTAAATATGAACAATATG
ATTTAA

Protein sequence :
MPAYQFTAIDASGKQQKGVLEGDSARQIRQQLRDKAWTPISVDPVEQKDKHQSHGLFQKKFSAYDLALMTRQLSVLVAAA
IPLEEALRAVSRQSEKAHVQNLLLSVRSKVLEGHSLAQGMQQSGRFPDLYIATVAAGERSGHLDLILDQLSDYTENRFAM
QKKVQGAMIYPIILMLMSFGIVMGLMTYVVPEIVKTFDQSKDALPWITVALMKASDFIRHAWVFIILFAIVGVVAFVRFL
KTTAGHYAFDRLTLKLPLFGKLSRGINAARFASTLSILTRSGVPLVDALKIGAAVTNNWVIRDSISQAAERVTEGGNLGT
QLERSGYFPPMMVQMIRSGEASGELDRMLERASTMQDREVTTFISTLLALLEPLMLVLMASIVLVIVIAVMLPIVNMNNM
I

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF YP_854405.1 type II secretion protein GspF Not tested PAI I APEC-O1 Protein 2e-61 42
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-61 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABTW07_0411 YP_005797307.1 Type II secretory pathway, component PulF VFG0181 Protein 2e-85 49
ABTW07_0411 YP_005797307.1 Type II secretory pathway, component PulF VFG2049 Protein 3e-60 42
ABTW07_0411 YP_005797307.1 Type II secretory pathway, component PulF VFG1870 Protein 5e-69 41