Gene Information

Name : sitA (KVU_2158)
Accession : YP_005795993.1
Strain : Ketogulonicigenium vulgare WSH-001
Genome accession: NC_017384
Putative virulence/resistance : Virulence
Product : Mn+2/Fe+2 ABC transporter substrate-binding protein SitA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2276883 - 2277788 bp
Length : 906 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTGGGACGATGATGCGTTTGCTGGGTGCTGTTGCGGCAACGGCGCTGATGACAAACGCGGCGATGGCGAATGATGC
ACGGCTGAAAGTGGTGACCACCTTTACCGTGCTGGCCGATATGGCGCAGCGCGTGGCGGGTGATGCGGCAGATGTCGTGT
CGATCACCGTGCCCGGTGCGGAAATCCACGGATACGAGCCGACGCCCCAAGATATCGTCCGCGCCCAAGGGGCCGATCTG
ATCCTGTGGAACGGGTTGAATCTGGAACTGTGGTTCCAGCAATTCCTGAACAATTTGGGGGATGTGCCCTCGGTCACGCT
GACCGACGGGATTGATCCGATTTCGATTTCTGGCGGGGATTATGACGGCCGTCCCAATCCCCATGCGTGGATGGGTCTGG
ATAACGCCATCATCTATATCAACAATATCGAAGCGGCCCTTGCGCAGCACGACCCGGGCAATGCGAGCATTTATGCCGCG
AATGCCGATGCCTATCGCGACGAGCTGCGCGCGGTGCTAGAGCCATTGCGGGCCGAGATCGCCGCCGTTCCCGAGGCGCA
GCGCTGGTTGGTCACCTGCGAAGGCGCGTTCAGCTATCTCGCCCGCGATTTTGGTCTGCACGAGCTGTATCTGTGGCCGA
TGAACGCGGACCAGATGGGCACGCCGCGCCAGGTGCGCGCGGTCATCGACGGCGTGCGCGAACATCATATTCCGGTCGTC
TTTTGCGAGAGTACCGTCAACACCGGCCCCGCCAAACAGGTCGCGCGCGAGACGGGCGCCACCTATGGCGGTGAGCTTTA
CGTCGATAGCCTGTCCGAACCCGATGGCCCGGTGCCGACATATCTCGATTTGTTGCGTGTGACGTCGGAAACCGTTGCGC
GCGGCCTGACCGGCGCGGCACAATAA

Protein sequence : 
MSGTMMRLLGAVAATALMTNAAMANDARLKVVTTFTVLADMAQRVAGDAADVVSITVPGAEIHGYEPTPQDIVRAQGADL
ILWNGLNLELWFQQFLNNLGDVPSVTLTDGIDPISISGGDYDGRPNPHAWMGLDNAIIYINNIEAALAQHDPGNASIYAA
NADAYRDELRAVLEPLRAEIAAVPEAQRWLVTCEGAFSYLARDFGLHELYLWPMNADQMGTPRQVRAVIDGVREHHIPVV
FCESTVNTGPAKQVARETGATYGGELYVDSLSEPDGPVPTYLDLLRVTSETVARGLTGAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-81 63
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-81 63
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-81 63
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-81 63
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 9e-82 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_005795993.1 Mn+2/Fe+2 ABC transporter substrate-binding protein SitA BAC0349 Protein 5e-82 63
sitA YP_005795993.1 Mn+2/Fe+2 ABC transporter substrate-binding protein SitA BAC0439 Protein 3e-77 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_005795993.1 Mn+2/Fe+2 ABC transporter substrate-binding protein SitA VFG0525 Protein 5e-82 63