|
Name : glnA (KHP_0806) Accession : YP_005793198.1 Strain : Helicobacter pylori 51 Genome accession: NC_017382 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 864113 - 865558 bp Length : 1446 bp Strand : + Note : similar to HP0512 DNA sequence : ATGGTAGTAAGAACTCAAAATAGTGAAAGCAAGATCATAGAGTTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCACATCGCTTATTCTTTTGGGGCTTTAACGCATGGCATGTTTA AAGAGGGGATTCCTTTTGATGCGAGTTCTTTTAAGGGCTGGCAAGGCATTGAACACTCTGATATGATTTTAACCCCCGAT TTGGTGCGTTATTTCATTGACCCTTTTAGTGCGGATGTGAGCGTGGTCGTGTTTTGCGACGTGTATGATGTGTATAAAAA CCAGCCTTATGAGAAATGCCCTAGAAGTATCGCTAAAAAAGCCTTACAACATTTAAAAGATTCAGGTTTGGGCGATGTGG CTTATTTTGGCGCAGAAAATGAATTTTTTATCTTTGATTCCATTAAAATTAAAGACGCTTCCAATTCCCAATACTATGAA GTGGATAGCGAAGAGGGCGAATGGAATAGGGATAGAAGTTTTGAAAATGGCGTGAATTTTGGGCATAGACCGGGCAAGCA AGGGGGCTATATGCCTGTGCCGCCAACGGATACGATGATGGATATTCGCACAGAAATTGTGAAAGTCTTAAACCAAGTGG GGTTAGAAACTTTTGTCGTCCATCATGAAGTCGCGCAAGCGCAAGGCGAAGTGGGCGTGAAATTTGGGGATTTAGTGGAA GCCGCTGACAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGCAAAACCGCCACTTTTATGCC AAAACCTTTATATGGGGATAACGGGAGCGGGATGCACACCCATGTGAGTGTTTGGAAAAACAACGAAAACCTTTTTAGCG GCGAAACTTACAAGGGCTTGAGCGAGTTGGCGTTGCATTTTTTAGGGGGCGTGTTGCGCCACGCTAGAGGGTTGGCCGCT TTCACTAACGCTTCCACTAATTCTTATAAACGCCTAATTCCTGGCTATGAAGCCCCATCTATTTTAACCTATTCGGCTAA CAACAGGAGCGCGAGCGTGCGTATCCCTTATGGGATTTCTAAAAACAGCGCGAGGTTTGAATTCAGATTTCCCGATAGCT CATCAAACCCCTACTTGGCTTTTTCAGCGATTTTAATGGCAGGCATGGATGGCGTTAAAAATAAGATTGATCCCGGCGAA GCGATGGATATTAACCTTTTCAAATTGACTTTAGATGAAATCAGAGAAAAGGGTATCAAGCAAATGCCCCACACCTTAAG GAGATCGCTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAAGGTCATGTCTTTAGCGAAGAATTTATTCAAGCCT ATCAATCTCTTAAATTCAACGCTGAAGTGTTCCCATGGGAGAGCAAACCCCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MVVRTQNSESKIIEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMFKEGIPFDASSFKGWQGIEHSDMILTPD LVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDRSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSELALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFSAILMAGMDGVKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKEGHVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_005793198.1 | glutamine synthetase | VFG1399 | Protein | 4e-89 | 45 |
