Gene Information

Name : cagQ (KHP_0785)
Accession : YP_005793177.1
Strain : Helicobacter pylori 51
Genome accession: NC_017382
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein Q
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 837338 - 837718 bp
Length : 381 bp
Strand : -
Note : similar to jhp0483

DNA sequence : 
ATGCTCTCTGCTAAAACACGCATTAGAACTCAGAGCAAGCAAGAACTTGTGCGACCAAAAATAAAAGGATTGGTTATGGG
AAAAATTTTAGCTTCTTTGTTGGGTGGTGGAACAAATCTTTTTACAGGTTTATCTAGTGATTTGTTTTCTATGATATTAA
ATTTTTTGTTCTTTCTAATATTAATGATGGGACTTAATGAAATATTAGAGAAGAAATTCAACTTACCCATGGATAATATC
AAGAATTTTATGACGGAAGTGCTGAAGAATGGATTTGGTAGTATGAAAAACATGGGATCTGCTTTGATTGGCAATGGTTT
TAGCAGTAGCAAATCAGACAAAACCGCTAATAAAATGAGTGTCCCCCAAGTAAAACTTTAG

Protein sequence : 
MLSAKTRIRTQSKQELVRPKIKGLVMGKILASLLGGGTNLFTGLSSDLFSMILNFLFFLILMMGLNEILEKKFNLPMDNI
KNFMTEVLKNGFGSMKNMGSALIGNGFSSSKSDKTANKMSVPQVKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0535 BAD13951.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-31 98
HP0535 BAD14033.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-26 86
cagQ AAC44691.1 CagQ Virulence cag PAI Protein 5e-26 86
cag14 AAR03897.1 Cag14 Virulence cag PAI Protein 5e-26 86
cag14 AAR03958.1 Cag14 Virulence cag PAI Protein 5e-26 86
cagQ NP_223201.1 cag island protein Virulence cag PAI Protein 9e-26 86
HP0535 NP_207331.1 cag pathogenicity island protein (cag14) Virulence cag PAI Protein 3e-26 85
HP0535 BAD13868.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-25 85
cag14 AAR03927.1 Cag14 Virulence cag PAI Protein 2e-25 85
cag14 AAR03869.1 Cag14 Virulence cag PAI Protein 1e-25 85
cagQ YP_003728730.1 cag pathogenicity island protein Q Virulence cag PAI Protein 5e-25 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cagQ YP_005793177.1 cag pathogenicity island protein Q VFG0294 Protein 9e-27 85