Gene Information

Name : cag17 (KHP_0781)
Accession : YP_005793174.1
Strain : Helicobacter pylori 51
Genome accession: NC_017382
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein N
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 833631 - 834551 bp
Length : 921 bp
Strand : -
Note : similar to HP0538

DNA sequence : 
TTGAAAGGTATCTTCAAAAAACTAGGTTCTGTCGCTCTTTATTTTTTAGTTATTTATGGGGGCTTAAACGCTATCAATAC
AGCATTATTACCGAGTGAATACAAAAAATTAGTGGCTTTAGGCTTTAAAAAAATCAAAACATTCCATCAAAGACATGACG
AAAAAGAAGTTACAGAAGAGGAAAAAGAATTCGCCACTAACGCTTTGAGAGAAAAATTACGAAATGATAGGGCGAGAGCG
GAGCAAATTCAAAAGAATATTGAAGCGTTTGAAAAAAAGAACAACTCTTCTATTCAAAAAAAAGCGGCTAAACACAAAGG
ACTACAAGAATTAAACGAAACTAACGCTAACCCTTTGAATGACAACCCTAATAGCAATTCTTCCACTGAAAACAAATCTA
ATAAAGATGATAACTTTGATGAGATGATCAATAAGGTGAATGAAGCTTTTGTGAAACCTGCTGCTCCGCTTGTGCCTAAT
GAGTGGAGAACACCTGAAATTGAAATCATTATCAATGAGTGTATTATTTCAAGCAACGATTACGATGGGTTAAGAAAGTG
TTTGATCAAAAACATCAAGAATCAAAAAATTCTTGCCCCCTTATTAGAAAAAATTCAAGAAATAGAGACAGAAAATAACA
AGTTTTCTAGACAACACTTGAGTGGTTTAAAACTCGCTCTTAATAACAGCAACAATAGAACCTTTCTTATAGCTTCATGT
GCTATTTGTGAGAAGAGAAAAAAAGAAATGGAGCAAGAAAACAACCACCAAGATACTACAAATGCAAGTGAGTTTGGAGC
TACTGATGCAAAAGAAAATGAAGCAAAAGATGCAACATTCTCAAACAATCGTTCTAAATCTGAACTGCCCAATAGCGTCA
TTAATCAAATAGAACAAAGCATCGCTCATGGAAAAAAATAG

Protein sequence : 
MKGIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDEKEVTEEEKEFATNALREKLRNDRARA
EQIQKNIEAFEKKNNSSIQKKAAKHKGLQELNETNANPLNDNPNSNSSTENKSNKDDNFDEMINKVNEAFVKPAAPLVPN
EWRTPEIEIIINECIISSNDYDGLRKCLIKNIKNQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
AICEKRKKEMEQENNHQDTTNASEFGATDAKENEAKDATFSNNRSKSELPNSVINQIEQSIAHGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagN YP_005779055.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-111 99
cagN YP_005777279.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-111 99
HP0538 BAD13790.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-111 99
HP0538 BAD14009.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-111 99
HP0538 BAD13817.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-111 99
HP0538 BAD13954.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-111 98
HP0538 BAD14063.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-111 98
HP0538 BAD13899.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-111 98
cagN YP_005774533.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-111 97
HP0538 BAD13844.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-108 97
HP0538 BAD13981.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-109 97
cagN YP_005775738.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-109 96
HP0538 BAD13871.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-109 96
HP0538 ABC25004.1 cag pathogenicity island protein N Virulence cag PAI Protein 3e-107 95
HP0538 NP_207334.1 cag pathogenicity island protein (cag17) Virulence cag PAI Protein 2e-107 95
cag17 AAR03961.1 Cag17 Virulence cag PAI Protein 3e-107 95
cagN YP_003728726.1 cag pathogenicity island protein N Virulence cag PAI Protein 3e-106 95
cag17 AAR03872.1 Cag17 Virulence cag PAI Protein 1e-107 95
HP0538 BAD14036.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-106 94
cag17 AAR03930.1 Cag17 Virulence cag PAI Protein 5e-108 94
cag17 AAR03900.1 Cag17 Virulence cag PAI Protein 8e-105 94
HP0538 BAD13926.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-105 93
cagN NP_223204.1 cag island protein Virulence cag PAI Protein 1e-105 93
cagN AAF80207.2 CagN Virulence cag PAI Protein 4e-106 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cag17 YP_005793174.1 cag pathogenicity island protein N VFG0297 Protein 9e-108 95