Gene Information

Name : cag19 (KHP_0779)
Accession : YP_005793172.1
Strain : Helicobacter pylori 51
Genome accession: NC_017382
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 831693 - 832838 bp
Length : 1146 bp
Strand : +
Note : similar to HP0540

DNA sequence : 
GTGAAATGTTTTTTAAGCATATTTTCTTTCTTAACTTTTTGTGGCTTGTTTCTGAATGGCGCAGGGGCAGTAATAACGCT
TGAATCTGCCTTAAAAGCCATTCAGGCGGATGCACAAGCCAAACAAAAAACCGCTCAAGCCGAATTAAAAGCCATAGAGG
CTCAATCTAGTGCCAAAGAAAAAGCCATTCAAGCGCAAATAGAGGGACAATTGAGAACTCAGCTTGCAACTATAAGCGCT
ATGTTAAAAGGGGCTAATGGCGTTATTAATGGTGTCAATAGCATGACAGGGGGGTTTTTTGCAGGTTCAGACATCTTGCT
TGGCGTCATGGAAGGGTATTCAAGCGCGCTTAGCGCATTGGGAGGAAATGTCAACATGATCGTGGAAAAACAAAAAATTA
ATACCCAAACAGAAATCCAAAACATGCAAATTGTGCTCCAAAAAAATAACGAAATGATCAAGCTCAAAATGAACCAGCAA
AACGCTCTCTTAGAAGCGTTAAAAAACAGCTTTGAACCGAGCGTTACCCTAAAAACACAAATGGAAATGCTTTCTCAAGC
TCTAGGAAGTTCTTCTGACAACGCTAAATACATCGCTTACAATACGATTGGTATCAAGGCGTTTGAAGAAACCTTAAAAG
GTTTTGAAACATGGTTGAAAGTGGCTATGCAAAAAGCAACCCTTATTGACTACAATTCCCTAACAGGTCAGGATTTGTTT
CAAAGCACCATCTACGCGCCTGCTCTTAGTTTTTTTTCAAGCATGGGTGCACCATTTGGAATCGTTGAAACATTTACTCT
AGCACCCACAAAATGCCCCTATCTTGATGGGCTAAAAATTTCAGCATGCCTTATGGAACAGGTTATTCAGAATTACAGAA
AGATTGTAGCCCTTATTCAAAATAAACTAAATAATGCAGATTTTCAAAATATCGCTTATTTGAATGGGATCAATGAAGAA
ATCAAAACCTTAAAAGGATCAGTAGATTTGAATGCGCTCATAGAAGTTGCTATCTTAAACGCAGAAAATCATTTAAACTA
TATAGAGAATCTTGAAAAAAAAGCCGATCTCTGGGAAGAACAACTGAAATTAGAGAGAGAAACGACAGCAAGAAACATTG
CTAGCTCTAAAGTTATTGTCAAATGA

Protein sequence : 
MKCFLSIFSFLTFCGLFLNGAGAVITLESALKAIQADAQAKQKTAQAELKAIEAQSSAKEKAIQAQIEGQLRTQLATISA
MLKGANGVINGVNSMTGGFFAGSDILLGVMEGYSSALSALGGNVNMIVEKQKINTQTEIQNMQIVLQKNNEMIKLKMNQQ
NALLEALKNSFEPSVTLKTQMEMLSQALGSSSDNAKYIAYNTIGIKAFEETLKGFETWLKVAMQKATLIDYNSLTGQDLF
QSTIYAPALSFFSSMGAPFGIVETFTLAPTKCPYLDGLKISACLMEQVIQNYRKIVALIQNKLNNADFQNIAYLNGINEE
IKTLKGSVDLNALIEVAILNAENHLNYIENLEKKADLWEEQLKLERETTARNIASSKVIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0540 BAD13819.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-159 99
HP0540 BAD13792.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-159 99
HP0540 BAD14065.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-160 99
HP0540 BAD13901.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-160 99
HP0540 BAD14011.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-160 99
cagI YP_005779053.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-159 99
HP0540 BAD13846.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-160 99
cagI YP_005777281.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-159 98
cagI YP_005774531.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-154 98
HP0540 BAD13956.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-156 97
cagI YP_005775740.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-155 96
cag19 AAR03963.1 Cag19 Virulence cag PAI Protein 8e-155 96
HP0540 NP_207336.1 cag pathogenicity island protein (cag19) Virulence cag PAI Protein 6e-155 96
cagI NP_223206.1 cag island protein Virulence cag PAI Protein 7e-156 96
HP0540 BAD13873.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-155 96
cagI AAF80208.1 CagI Virulence cag PAI Protein 3e-155 96
HP0540 BAD14038.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-155 96
cag19 AAR03902.1 Cag19 Virulence cag PAI Protein 3e-156 96
cagI YP_003728724.1 cag pathogenicity island protein I Virulence cag PAI Protein 1e-154 95
cag19 AAR03874.1 Cag19 Virulence cag PAI Protein 3e-154 95
cagI AGC69802.1 cag pathogenicity island protein I Virulence cag PAI Protein 2e-154 95
cag19 AAR03932.1 Cag19 Virulence cag PAI Protein 7e-155 95
HP0540 BAD13928.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-154 95
HP0540 BAD13983.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-150 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cag19 YP_005793172.1 cag pathogenicity island protein I VFG0299 Protein 2e-155 96