|
Name : katA (KHP_0457) Accession : YP_005792853.1 Strain : Helicobacter pylori 51 Genome accession: NC_017382 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 486206 - 487723 bp Length : 1518 bp Strand : + Note : similar to HP0875 DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACTGCTTTTGGTGCTCCCGTTTGGGATGACAACAATGTGATTACGGCTGGTCC TAGAGGTCCTGTTTTATTACAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGATCGAGAAAGGATCCCTGAAAGGG TAGTGCATGCTAAAGGAAGCGGAGCTTATGGCACTTTCACCGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACCGAATGCTTTTTCAGATTTTCTACTGTGGCTGGTGAAAGAGGTTCTGCGGATGCGGT GAGAGACCCTAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGTAACTGGGATTTGGTAGGGAACAACACGCCTGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTCATCCACACTCAAAAACGAGACCCTCAAACCAATTTGCCTAATCCT GACATGGTATGGGATTTTTGGAGTAATGTTCCTGAAAGCTTGTATCAAGTAACATGGGTTATGAGCGATAGAGGGATCCC TAAATCTTTCCGCCACATGGATGGTTTTGGCAGCCATACTTTCAGTCTTATCAACGCTAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTCACACCATGCAAGGCGTTAAGCACTTGACTAACGAAGAAGCCGCAGAAGTCAGAAAATATGATCCTGAT TCCAATCAAAGGGATTTATTCAATGCGATCGCTAGAGGGGATTTCCCAAAGTGGAAATTAAGCATTCAAGTGATGCCAGA AGAAGATGCTAAGAAGTATCGATTCCATCCGTTTGATGTAACTAAGATTTGGTATCTCCAAGATTATCCATTGATGGAAG TGGGCATTGTAGAGTTGAATAAAAATCCTGAAAACTATTTTGCAGAAGTGGAGCAAGCGGCATTCTCTCCGGCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGATAGGATGTTGCAAGGGCGCTTGTTCTCTTATGGAGACACACACCGCTACCGCTT AGGGGTTAATTATCCTCAGATACCGGTCAATAAACCAAGGTGTCCGTTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ACGGATACTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCTGGCTATAAAGAGGATAAGAGTGCAAGAGATCCT AAGTTCAACTTAGCTCATATTGAGAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGATGATAGCGATTACTACAC CCAACCAGGTGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGCATGACACTATTGGAGAGTCTTTAGCTC ATGTTACCCATAAAGAAATTGTGGATAAACAATTGGAACATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGGAAAAGACATGCACCACACGAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNP DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPD SNQRDLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFSPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHGKDMHHTKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 8e-135 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 4e-92 | 52 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 6e-90 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 6e-90 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 6e-90 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 6e-90 | 47 |
