|
Name : ureA (hp2018_0078) Accession : YP_005790889.1 Strain : Helicobacter pylori 2018 Genome accession: NC_017381 Putative virulence/resistance : Virulence Product : Urease alpha subunit Function : - COG functional category : - COG ID : - EC number : 3.5.1.5 Position : 72634 - 74343 bp Length : 1710 bp Strand : - Note : - DNA sequence : ATGAAAAAGATTAGCAGAAAAGAATATGTTTCTATGTATGGCCCTACCACAGGCGATAAAGTGAGATTGGGCGATACAGA TTTGATTGCTGAAGTAGAACATGACTACACCATTTACGGCGAAGAGCTTAAATTCGGTGGCGGTAAAACCCTAAGAGAAG GCATGAGCCAATCCAACAACCCTAGCAAAGAAGAACTGGATTTGATCATCACTAACGCTTTAATCGTGGATTACACCGGT ATTTATAAAGCGGATATTGGTATTAAAGACGGCAAAATCGCTGGCATTGGTAAAGGCGGTAACAAAGACATGCAAGATGG CGTTAAAAACAATCTTAGCGTGGGTCCTGCTACTGAAGCGCTAGCCGGTGAAGGCTTGATCGTAACGGCTGGTGGTATTG ACACACACATCCACTTCATTTCACCCCAACAAATCCCCACAGCTTTTGCAAGCGGTGTAACAACCATGATTGGTGGCGGA ACCGGTCCTGCTGATGGCACTAATGCGACTACTATCACTCCAGGTAGAAGAAACTTAAAATGGATGCTCAGAGCGGCTGA AGAATATTCTATGAACTTAGGTTTCTTAGCTAAAGGCAACACTTCTAACGATGCGAGCTTAGCCGATCAAATTGAAGCCG GTGCGATTGGCTTTAAAATCCACGAAGACTGGGGCACCACTCCTTCTGCAATCAATCATGCGTTAGACGTTGCGGACAAA TACGATGTGCAGGTCGCTATCCACACAGACACTTTGAATGAAGCCGGTTGTGTAGAAGACACTATGGCTGCTATTGCCGG ACGCACTATGCACACTTTCCACACTGAAGGCGCTGGTGGCGGACACGCTCCTGATATTATTAAAGTGGCCGGTGAACACA ACATCCTACCCGCTTCCACTAACCCCACTATCCCTTTCACCGTGAATACAGAAGCCGAACACATGGACATGCTTATGGTG TGCCACCACTTGGATAAAAGCATTAAAGAAGATGTCCAGTTCGCTGATTCAAGAATCCGCCCTCAAACCATTGCGGCTGA AGACACTTTGCATGACATGGGGATTTTCTCCATCACCAGTTCTGACTCTCAAGCGATGGGCCGTGTGGGTGAAGTTATCA CTAGAACTTGGCAAACAGCTGACAAAAACAAAAAAGAATTTGGCCGCTTGAAAGAAGAAAAAGGCGATAACGACAACTTC AGGATCAAACGCTACTTGTCTAAATACACCATTAACCCAGCGATCGCTCATGGGATTAGCGAGTATGTAGGTTCAGTAGA AGTGGGCAAAGTGGCTGACTTGGTATTGTGGAGTCCAGCATTCTTTGGCGTGAAACCCAACATGATCATCAAAGGCGGAT TCATTGCGTTAAGCCAAATGGGCGATGCGAACGCTTCTATCCCTACCCCACAACCGGTTTATTACAGAGAAATGTTCGCT CACCATGGTAAAGCTAAATACGATGCAAACATCACTTTTGTGTCCCAAGCGGCTTATGACAAAGGCATTAAAGAAGAATT AGGGCTTGAAAGACAAGTGTTACCGGTAAAAAATTGCAGAAACATCACTAAAAAAGACATGCAATTCAACGACACTACCG CTCACATTGAAGTCAATCCTGAAACTTACCATGTGTTCGTGGATGGCAAAGAAGTCACTTCTAAACCAGCCAATAAAGTG AGCTTGGCTCAACTCTTTAGCATTTTCTAG Protein sequence : MKKISRKEYVSMYGPTTGDKVRLGDTDLIAEVEHDYTIYGEELKFGGGKTLREGMSQSNNPSKEELDLIITNALIVDYTG IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQQIPTAFASGVTTMIGGG TGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGNTSNDASLADQIEAGAIGFKIHEDWGTTPSAINHALDVADK YDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMV CHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDNDNF RIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFGVKPNMIIKGGFIALSQMGDANASIPTPQPVYYREMFA HHGKAKYDANITFVSQAAYDKGIKEELGLERQVLPVKNCRNITKKDMQFNDTTAHIEVNPETYHVFVDGKEVTSKPANKV SLAQLFSIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 4e-157 | 62 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 4e-157 | 62 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-146 | 59 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 4e-146 | 59 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 4e-146 | 59 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 4e-146 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureA | YP_005790889.1 | Urease alpha subunit | VFG0270 | Protein | 0.0 | 99 |
