|
Name : cag7a (hp2018_05111) Accession : YP_005791339.1 Strain : Helicobacter pylori 2018 Genome accession: NC_017381 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein Function : - COG functional category : - COG ID : - EC number : - Position : 507127 - 508728 bp Length : 1602 bp Strand : - Note : - DNA sequence : TTGAAAAACGCCGATCCTAACGACAGAGCGGCTATCATGAAGTGTTTGGATGGTTTGAGCGATGAAGAGAAGCTCAAATA CCTGCAAGAAGCCAGAGAAAAGGCTGTCTTGGATTGTTTGAAAACGGCTAGGACCGATGAAGAAAAAAGGAAATGCCAAA ACCTTTATAGCGATTTGATCCAAGAAATCCAAAATAAAAAGGCACAGAACAAACAAAATCAATTGAGTAAAACAGAAAGG TTGCATCAAGCAAGCGAGTGCTTGGATAACTTAGATGACCCTACTGATCAAGAAGCCATAGAGCAATGTTTAGAGGGCTT GAGCGATAGCGAAAGGGCGCTAATTCTAGGAATCAAACGACAAGCTGATGAAGTGGATCGGATTTATAGCGATCTAAGAA GCCGCAAAACCTTTGATAACATGGCGGCTAAAGGTTATCCATTGTTGCCAATGGATTTCAAAAATGGTGGCGATATTGCT ACTATTAACGCCACTAATGTTGATGCGGACAAAATAGCTAGCGATAATCCTATTTATGCTTCCATAGAGCCTGATATTAC TAAACAATACGAAACAGAGAAAACCATTAAGGATAAGAGTTTAGAAGCTAAATTAGCTAAGGCTTTAGGTGGCGATAAAA AAGATGACGATAAAGAAAAAAGTAAAAAACCCACAGCAGAAACTAAAGCAGAAAGCAATAAGATAGACAAAGATGTCGCA GAAACTGCCAAAAATATCAGCGAAATCGCTCTTAAGAACAAAAAAGAAAAGAGTGGGGATTTTGTAGATGAAAATGGTAA TCCCATTGACGATAAAAAGAAAGAAGAAAAACAAGATGAAACAAGCCCTGTCAAACAGGCCTTTATAGGCAAGAGTGATC CCACATTTGTTTTAGCGCAATACACTCCCATTGAAATCACTCTGACTTCTAAAGTAGATGCCACTCTCACGGGTATAGTG AGTGGGGTTGTAGCCAAAGATGTATGGAACATGAACGGCACTATGATCTTATTAGACAAAGGCACTAAGGTGTATGGGAA TTATCAAAGCGTGAAAGGTGGCACGCCTATTATGACTCGCTTAATGATAGTCTTCACTAAAGCCATTACGCCTGATGGGG TGATTATACCTCTAGCAAACGCTCAAGCAGCAGGCATGTTGGGTGAAGCAGGGGTAGATGGCTATGTGAATAATCACTTC ATGAAGCGCATAGGCTTTGCTGTGATAGCAAGCGTGGTTAATAGCTTCTTGCAAACCGCGCCTATCATAGCCCTAGATAA ACTCATAGGTCTTGGCAAAGGCAGAAGTGAAAGGACACCTGAATTTAATTACGCTTTGGGTCAAGCTATCAATGGCAGTA TGCAAAGTTCAGCTCAGATGTCTAATCAAATTCTAGGGCAACTGATGAATATCCCCCCAAGTTTTTACAAAAATGAGGGC GATAGTATTAAGATTCTCACCATGGACGATATTGATTTTAGCGGCGTGTATGATGTTAAAATTACCAACAAATCTGTGGT AGATGAAATTATCAAACAAAGCACCAAAACTTTGTCTAGAGAACATGAAGAAATCACCACAAGCCCCAAAGGTGGCAATT GA Protein sequence : MKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKKAQNKQNQLSKTER LHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILGIKRQADEVDRIYSDLRSRKTFDNMAAKGYPLLPMDFKNGGDIA TINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDKSLEAKLAKALGGDKKDDDKEKSKKPTAETKAESNKIDKDVA ETAKNISEIALKNKKEKSGDFVDENGNPIDDKKKEEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIV SGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNHF MKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEG DSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cag7 | AAR03861.1 | Cag7 | Virulence | cag PAI | Protein | 0.0 | 98 |
| cag7 | AAR03911.1 | Cag7 | Virulence | cag PAI | Protein | 0.0 | 98 |
| cag7 | AAR03950.1 | Cag7 | Virulence | cag PAI | Protein | 0.0 | 98 |
| cag7 | AAR03919.1 | Cag7 | Virulence | cag PAI | Protein | 0.0 | 97 |
