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Name : hp2018_0506 (hp2018_0506) Accession : YP_005791334.1 Strain : Helicobacter pylori 2018 Genome accession: NC_017381 Putative virulence/resistance : Virulence Product : cagGamma protein Function : - COG functional category : - COG ID : - EC number : - Position : 502154 - 502663 bp Length : 510 bp Strand : + Note : - DNA sequence : TTGTTTGAGAAATGGATTGGTCTGACCTTACTCCTTAGTTCCTTAGGCTATCCATGCCAAAAGGTAGCCATTAGTTTCAA GCAATACGAAAATCTTATCCATATCCATCAAAAAGGCTGCGACAATGAAGTGGTGTGCAGAACGCTCATCTCTATCGCTT TACTAGAAAGCTCTCTAGGGTTGAACAACAAGCGAGAAAAATCCCTTAAAGACACTTCTTACTCCATGTTCCATATCACC TTAAACACCGCTAAAAAGTTCTACCCTACCTATTCTAAAACGCTTCTCAAAACCAAATTGTTAAACGATGTGGGTTTTGC GATCCAATTAGCCAAACAAATTTTAAAAGAAAATTTTGATTATTACCACCAAAAACACCCCAACAAAAGCGTGTATCAAT TAGTAGAAATGGCCATAGGCGCTTACAATGGGGGAATGAAACACAACCCTAATGGCGCTTACGTGAAGAAGTTTCGTTGC ATTTATTCTCAAGTGCGATACAACGAATAA Protein sequence : MFEKWIGLTLLLSSLGYPCQKVAISFKQYENLIHIHQKGCDNEVVCRTLISIALLESSLGLNNKREKSLKDTSYSMFHIT LNTAKKFYPTYSKTLLKTKLLNDVGFAIQLAKQILKENFDYYHQKHPNKSVYQLVEMAIGAYNGGMKHNPNGAYVKKFRC IYSQVRYNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf9 | NP_223190.1 | cag island protein | Virulence | cag PAI | Protein | 2e-64 | 99 |
| cag4 | AAR03886.1 | Cag4 | Virulence | cag PAI | Protein | 1e-62 | 98 |
| cag4 | AAR03855.1 | Cag4 | Virulence | cag PAI | Protein | 7e-68 | 96 |
| HP0523 | NP_207319.1 | cag pathogenicity island protein (cag4) | Virulence | cag PAI | Protein | 1e-68 | 96 |
| cag4 | AAR03946.1 | Cag4 | Virulence | cag PAI | Protein | 8e-69 | 96 |
| HP0523 | BAD14022.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-66 | 93 |
| cag4 | YP_005779067.1 | cag island protein | Virulence | cag PAI | Protein | 6e-66 | 93 |
| cag4 | AAR03915.1 | Cag4 | Virulence | cag PAI | Protein | 1e-66 | 93 |
| cag4 | YP_005777267.1 | cag island protein | Virulence | cag PAI | Protein | 3e-66 | 93 |
| HP0523 | BAD13802.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-66 | 93 |
| cag4 | AGC69794.1 | cag pathogenicity island protein 4 | Virulence | cag PAI | Protein | 9e-66 | 93 |
| cag4 | YP_005774546.1 | cag island protein | Virulence | cag PAI | Protein | 1e-66 | 93 |
| HP0523 | BAD13775.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-66 | 93 |
| HP0523 | BAD13939.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-66 | 93 |
| HP0523 | BAD14048.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-66 | 93 |
| cag4 | YP_003728743.1 | cag pathogenicity island protein gamma | Virulence | cag PAI | Protein | 1e-65 | 93 |
| HP0523 | BAD13829.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-65 | 92 |
| HP0523 | BAD13994.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 9e-66 | 92 |
| HP0523 | BAD13884.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 8e-66 | 92 |
| cag-gamma | AAF80194.1 | Cag-gamma | Virulence | cag PAI | Protein | 7e-66 | 92 |
| HP0523 | BAD13856.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-65 | 92 |
| cag4 | YP_005775726.1 | cag island protein | Virulence | cag PAI | Protein | 8e-65 | 92 |
| HP0523 | BAD13911.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-65 | 90 |
| HP0523 | BAD13966.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-46 | 88 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hp2018_0506 | YP_005791334.1 | cagGamma protein | VFG0283 | Protein | 3e-69 | 96 |
