|
Name : cag2 (hp2018_0504) Accession : YP_005791332.1 Strain : Helicobacter pylori 2018 Genome accession: NC_017381 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein Function : - COG functional category : - COG ID : - EC number : - Position : 500047 - 500706 bp Length : 660 bp Strand : + Note : - DNA sequence : ATGAGTCTAGTTACGAGTTACAGTGTGAGTAATAATTTTTCTAAGTTTAATATTAAGAGAGTCAGAGGATATTTGATTTG TTTTGTTTGTAACACACCTAAAATGATACAAAGAGGATTGAATGGTATCTCATTTTATGGTTGCTCTGATTATGTAAATA AAGGCGACTGTAAGGGCGTTTTACGAGAAATAAATGGCTCAATGAAAATGGTCTGCTTGCATTGTGAAAACACGCCCATA ATGGAAAAAGTAGAAAGTGGTAGGGGAGGAGCTTACGCTTGTAAGAATTGCAATAGGAAGTTTTACTTTATTGATCTTGC AAAACAAAACGAACGAAAAAAAGATTTAGAAAAAGAAAAAAAAGAATTGCTTAATAAGATTGAAAAGCAAAAAATCAAAC GCCTTGAGCGTTTCATTTTGGCTGGTGTAAAAGCTAATATTAAAGAAAATTCTTTTTTCTTAGGATGTAAAAATTATCCT AAGTGCGAATGGACTGCTAGTATGGATTCACAAGATCTTAAATGTCCCAAATGCAACAGATTAATGAAAAGAAAAAAGAA TTTCAAAAACAATGAGTTTTTTACGGCTACATCGCTTACCTTAAATGCAATGGAATTTTGTCTCCATATTAATCTGAAAA AAAAGGAAACCAATGTTTAG Protein sequence : MSLVTSYSVSNNFSKFNIKRVRGYLICFVCNTPKMIQRGLNGISFYGCSDYVNKGDCKGVLREINGSMKMVCLHCENTPI MEKVESGRGGAYACKNCNRKFYFIDLAKQNERKKDLEKEKKELLNKIEKQKIKRLERFILAGVKANIKENSFFLGCKNYP KCEWTASMDSQDLKCPKCNRLMKRKKNFKNNEFFTATSLTLNAMEFCLHINLKKKETNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf7 | NP_223188.1 | cag island protein | Virulence | cag PAI | Protein | 3e-76 | 97 |
