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Name : hp2018_0493 (hp2018_0493) Accession : YP_005791320.1 Strain : Helicobacter pylori 2018 Genome accession: NC_017381 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : - COG ID : - EC number : 6.3.1.2 Position : 490348 - 491793 bp Length : 1446 bp Strand : - Note : - DNA sequence : ATGGTAGTAAGAACTCAAAATAGCGAAAGCAAGATCAAAGAATTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCATATCGCTTATTCTTTTGGGGCTTTAACGCATGACATGTTTA AAGAGGGGATTCCTTTTGATGCGAGCTCTTTTAAAGGCTGGCAAGGCATTGAACACTCGGATATGATTTTAACCCCCGAT TTGGTGCGTTATTTCATTGACCCTTTTAGCGCGGATGTGAGCGCGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAAAAATGCCCTAGAAGTATCGCTAAAAAAGCCCTAAAACATTTAAGAGATTTAGGCTTGGGCGATGTGG CTTATTTTGGCGCGGAGAATGAATTTTTTATCTTTGATTCTATTAAGATTAAAGACGCTTCCAATTCCCAATACTACGAA GTGGATAGCGAAGAGGGCGAATGGAATAGGGATAAAAGCTTTGAAAATGGCGTCAATTTTGGGCATAGACCGGGAAAGCA AGGAGGCTATATGCCTGTACCGCCAACGGATACGATGATGGATATTCGCACAGAAATCGTGAAAGTCTTAAACCAAGTGG GTCTAGAAACTTTCGTCGTCCATCATGAAGTCGCGCAAGCGCAAGGCGAGGTGGGCGTGAAATTTGGGGATTTGGTGGAA GCCGCTGACAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGGAAAACGGCTACTTTCATGCC AAAACCCCTATATGGGGATAATGGGAGCGGGATGCACACCCATGTGAGTGTTTGGAAGAATAATGAAAACCTTTTTGGTG GCGAAACTTACAAGGGCTTGAGTGAGTTTGCCTTGCATTTTTTAGGGGGCGTGTTGCGCCACGCTAGAGGGTTAGCCGCT TTCACTAACGCTTCCACTAACTCTTACAAACGCCTGATTCCAGGATATGAAGCCCCATCCATTTTAACCTATTCAGCCAG CAATAGGAGTGCTAGCGTGCGTATCCCTTATGGGATTTCTAAAAACAGCGCTAGGTTTGAATTCAGGTTTCCTGACAGCT CATCAAACCCCTACCTGGCTTTTGGGGCTATTTTAATGGCAGGCATTGATGGCGTTAAAAATAAAATGGATCCCGGCGAA GCGATGGACATTAACCTTTTCAAGCTAACTTTGGACGAAATCAGAGAAAAAGGCATCAAACAAATGCCCCACACTTTAAG GAGATCGTTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAGGGTCAGGTCTTTAGCGAAGAATTTATCCAGGCCT ATCAGTCTCTTAAATTCCATTCTGAAGTGTTCCCATGGGAGAGTAAACCCCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MVVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHDMFKEGIPFDASSFKGWQGIEHSDMILTPD LVRYFIDPFSADVSAVVFCDVYDVYKNQPYEKCPRSIAKKALKHLRDLGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDKSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFGGETYKGLSEFALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSASNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFGAILMAGIDGVKNKMDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKEGQVFSEEFIQAYQSLKFHSEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hp2018_0493 | YP_005791320.1 | glutamine synthetase | VFG1399 | Protein | 1e-88 | 45 |
