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Name : tktA (hp2018_0365) Accession : YP_005791185.1 Strain : Helicobacter pylori 2018 Genome accession: NC_017381 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 362266 - 364191 bp Length : 1926 bp Strand : - Note : - DNA sequence : ATGCAATTGAGTAACGCTGATTTAGAACGATTAAAAAGCATGGCGAACACGCTTCGCTTTTTGTGCGCGGACATGATAGA TAAGGCTAATAGCGGGCATCCGGGCGTGTGTTTAGGGCTAGCTGATGTGATGGTGGTTTTAAGCTTGCACCTCAACCTAA ACCCCACCAACCCTAAATGGCTCAATAGGGACAGGTTGGTTTTTAGCGGAGGGCATGCGAGTGCGTTAGCGTATAGTTTG TTGCATTTGTGGGGCTTTGATTTGAGTTTAGACGATCTAAAGCGTTTCAGGCAATTACACTCTAAAACCCCAGGACACCC TGAATTGCACCACACCGAAGGCATTGAGATTACGACAGGCCCTTTAGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGCCAATACGCTCAAACCCTTTTAGATAAAGAAGCGATTTCTCATAAAGTCTATTGCTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGTTATGAGAGCGCTTCTTTAGCCGGGCACCTTCGCCTTGATAACCTCATTGTGATTTATGACAG CAATCAGATCAGCATTGAAGGCGCTATTAATATTAGTTTTAGCGAACAGGTTAAAACGCGTTTTTTAGCACAAAATTGGG AAGTGCTAGAATGCGATGGGCATGACTATCAAGCGATTCACAACGCTTTAGAAGAAGCCAAAAAGTCCCATAAACCCACG CTTTTAATCGCTCATACGATTATTGGTAAGGGGGCTATTGGCTTAGAGGGGAGTGAAAAAACGCATGGATCGCCTTTAAA CAAAGAAGTATTGAAACAATCCAAAGAAAACGCTCAAATCAATCCTAATGAAAGCTTTATAATTAGCCCAAAAAACAAAA TGCATTTTGAAGAAGTGAGGGTTAGGGGCGTTAGTTTAGAAGCCTTATGGGAAAAATCCTTAAGCCCTAAAACAAAAGAA AAGATCCATGCGTTGAAGAATTTTGATTTTAACACCATTAATTACCCCGCCTTTAAAAAAGGCGAATCTCTAGCCACGAG AGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAGGGTTTTTTGGGGGGGAGCGCGGATTTAGCCCCCT CCAATAACACGCATTTGAAACACTCTGGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGTTTGTTTTTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTATTT AATGCCTAGCATTCGTTTGAGCGCTTTAATGAAACTAAAAGCCCTTTTTATCTTCACGCATGACAGCATTGGGGTGGGCG AAGACGGGGCGACGCACCAGCCCATAGAGCAATTGAGCCATTTACGAGCCTTGCCGCATTTCTATGCTTTCAGGCCTAGC GATGCTCTTGAAAATAAGGCTTGCATGCAAGTGGCGTTAAGTTTGAACGCCCCTAGCGCTCTTATTTTATCGCGCCAGAA TTTGCCCGTACTAGATGAGGTCTCTAAAGAGCAGGTTTTAAAAGGGGCGTATGTTAAACACCACTCTAAAGATCCCATTA TCACGCTTGTTGCGAGCGGGAGCGAGGTCTCTTTGGCTTTAGAGAGCGCTAAGATTTTAGAGCGAGAAAATATCCCCACT CAAGTGGTGAGCGTGCCATGCTTTGATTTATTGATAGAGCAAGATGAAAGCTATTTTAAAGAACTCTTTAAGGGTAAAGT CTTAGTGATTGAAGCGAGCCGCGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGAGTT CAGCAAAAGGCGATAAACTCTTTGAAAAATTTGGCTTTAGCGTTGAAAACGTTACCGCTCAAGCGAAAAGGTTACTCAAC GCATGA Protein sequence : MQLSNADLERLKSMANTLRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLDDLKRFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQTLLDKEAISHKVYCLCGDGD LQEGISYESASLAGHLRLDNLIVIYDSNQISIEGAINISFSEQVKTRFLAQNWEVLECDGHDYQAIHNALEEAKKSHKPT LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLKQSKENAQINPNESFIISPKNKMHFEEVRVRGVSLEALWEKSLSPKTKE KIHALKNFDFNTINYPAFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTHLKHSGDFPLGQNLHFGIREHAM GAITNALAAYGLFLPFCATFFVFSDYLMPSIRLSALMKLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPHFYAFRPS DALENKACMQVALSLNAPSALILSRQNLPVLDEVSKEQVLKGAYVKHHSKDPIITLVASGSEVSLALESAKILERENIPT QVVSVPCFDLLIEQDESYFKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENVTAQAKRLLN A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-98 | 42 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-87 | 41 |
