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Name : tnpB1 (hp2018_14851) Accession : YP_005792345.1 Strain : Helicobacter pylori 2018 Genome accession: NC_017381 Putative virulence/resistance : Unknown Product : IS606 transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1504015 - 1505043 bp Length : 1029 bp Strand : + Note : - DNA sequence : ATGAAAGTCAATAAGGGTTTTAAATTCCGCTTGTATCCCACTAAAGAACAACAAGATAAATTGCAACACTGTTTTTTTGT CTATAATCAAGCTTATAATATTGGCTTGAATTTACTGCAAGAGCAATATGAAACAAACAAAGATTCACCTCCCAAAGAAA GAAAGTGGGAAAAATCAAGCGAGTTAGACAAAGCGATTAAACACCACTTGAACACTAGGGGGTTAAGCTTTAGTAGTGTA ATAGCCCAACAATCACGCATGAATGTTGAAAGGGCTTTAAAAGATGCTTTTAAAGTTAAAAACAGAGGCTTTCCTAAATT CAAGAACTCTAAATCCGCTAAACAATCTTTTTCGTGGAACAATCAAGGTTTCTCTATTAAAGAGAGCGATGAGGAACGCT TCAAGATATTCACTTTAATGAAAATGCCCTTAATGATGCGCATGCATAGAAACTTCCCTCCTCATTCTAAAGTGAAACAA ATTGTGATTTCTTGCAGACATAGAAAGTATTTTGTTAGCTTTAACGTGGAATACGAACAAGACATTATTCCCATCAAAAA CCCTAAAAATGGTGTGGGGCTAGATTTGAATATCCTTGATATAGCTTGTTCTTGTGGCGTGAATAATCACAAAAAACTAA CGGACTTTAAGCGATACTCAACAGACATGAAAGAATTACTAGGGATAGAAATAGATGAAGAGTTGGACACTAAATTACTC ATCCCTACTTATTCCAAATTGTATTCTTTAAAAAAACACTCTAAAAAATTTAAAAGATTGCAAAGAAAACAAAGCCGTAG GGTGTTAAAGTCTAAACAAAACAAAACCAAATTAGGAGGTAATTTTTACAAAACGCAAAAGAAATTAAACCAAGTCTTTG ACAAGTCTAGTCATCAAAAAACAGACAGATACCATAAAATCACAAGCGAACTTTCAAAGCAATTTGAATTGATAGTAGTT GAAGATTTGCAAGTAAAAAACATGACTAAAAGAGCTAAACTCAAAACTATCAAATCATCTCTTTTTTAG Protein sequence : MKVNKGFKFRLYPTKEQQDKLQHCFFVYNQAYNIGLNLLQEQYETNKDSPPKERKWEKSSELDKAIKHHLNTRGLSFSSV IAQQSRMNVERALKDAFKVKNRGFPKFKNSKSAKQSFSWNNQGFSIKESDEERFKIFTLMKMPLMMRMHRNFPPHSKVKQ IVISCRHRKYFVSFNVEYEQDIIPIKNPKNGVGLDLNILDIACSCGVNNHKKLTDFKRYSTDMKELLGIEIDEELDTKLL IPTYSKLYSLKKHSKKFKRLQRKQSRRVLKSKQNKTKLGGNFYKTQKKLNQVFDKSSHQKTDRYHKITSELSKQFELIVV EDLQVKNMTKRAKLKTIKSSLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | CAJ31329.1 | insertion sequence IS606 transposase homolog A | Not tested | cag PAI | Protein | 4e-133 | 95 |
| tnpB | AAR03857.1 | transposase B-like protein | Not tested | cag PAI | Protein | 1e-127 | 93 |
