Gene Information

Name : HPPN135_04165 (HPPN135_04165)
Accession : YP_005790042.1
Strain : Helicobacter pylori Puno135
Genome accession: NC_017379
Putative virulence/resistance : Virulence
Product : N-acetylneuraminic acid synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 846666 - 847703 bp
Length : 1038 bp
Strand : -
Note : COG2089 Sialic acid synthase

DNA sequence :
ATGGATTTTATTTTAGGCACTAGAAAAATTGGCATCAACCACACGCCTTTAGTGGTAGCTGAAATAGGGATCAACCATAA
TGGCAGTTTGGAAATCGCTAAACTCATGGTGGATGCAGCTAAAGAAGCTGGCATTGAAGTGATCAAACACCAAACGCACA
TTATTGAAGATGAAATGAGTTTGAGCGCTTTAAAGGTTATTCCTGGTAATAGCGAGTTAAGTATTTATGAAATCATGAAA
AAATGCGCTTTGAGCAAAAACGATGAAAGGGAATTGAAAGAATATGCAGAAAAACAAGGGCTGATTTTTCTCTCTACGCC
TTTTAGCCGAGCAGCAGCGAATTTTTTAGAAGATTTAGGTGTTGTGGGCTATAAAATAGGCTCTGGCGAAATGAATAATA
CCCCCTTATTGAAGCATATTGCCAACTTTAAAAAGCCCATGATTATTTCTACTGGGATGCATGATTTAGAGGGCGTGAAA
GAGTGTGTAAGCCCTATTTTAGATAAAGCGCCAATCGCTCTCCTCCATACGACAAACCTCTACCCAACGCCTTTTGAATT
GGTGCGCTTAAACGCTATGTTGGATTTAAAGAACGCGTTTAAGGTGCCGGTGGGTTTGAGCGATCACACTTTAAACAATA
ACGCTTGCAAGAGCGCTTTAGCTCTTGGAGCGAGCATCGTGGAACGACATTTTACGGACACTAAAGACAGAGAGGGGCCT
GATATTGTTTGCTCTATGGATAAAGAAGAGGCTAAAGATTTAGTCAAAAGCGCTCAAGAGATTTTTTTAATGCGTGGAGG
GAGTAAGACGAAAATTAAAGAAGAGCAAGTTACACGAGATTTTGCTTTCGCCACTATGGTGGCTATCAAACGCATCAAAA
AAGGCGAAAAAATCACTGAAAGTAACGCATGGGTGAAACGCCCGGGAGTTAAAGGGATTTTAGCGAAGGATTACGAAAAG
ACTTTGGGTAGAGTGGCTAAAATAGACATCAATACAGACGAACACATCTGCGATGAAATGCTAGAAAATAAGGAATAA

Protein sequence :
MDFILGTRKIGINHTPLVVAEIGINHNGSLEIAKLMVDAAKEAGIEVIKHQTHIIEDEMSLSALKVIPGNSELSIYEIMK
KCALSKNDERELKEYAEKQGLIFLSTPFSRAAANFLEDLGVVGYKIGSGEMNNTPLLKHIANFKKPMIISTGMHDLEGVK
ECVSPILDKAPIALLHTTNLYPTPFELVRLNAMLDLKNAFKVPVGLSDHTLNNNACKSALALGASIVERHFTDTKDREGP
DIVCSMDKEEAKDLVKSAQEIFLMRGGSKTKIKEEQVTRDFAFATMVAIKRIKKGEKITESNAWVKRPGVKGILAKDYEK
TLGRVAKIDINTDEHICDEMLENKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
siaC NP_273132.1 polysialic acid capsule biosynthesis protein SiaC Not tested IHT-A Protein 2e-83 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPPN135_04165 YP_005790042.1 N-acetylneuraminic acid synthetase VFG0252 Protein 7e-84 56