Gene Information

Name : HPPN135_02695 (HPPN135_02695)
Accession : YP_005789756.1
Strain : Helicobacter pylori Puno135
Genome accession: NC_017379
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein C
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 536871 - 537218 bp
Length : 348 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATTTCTTACAAGAATCACTGACAGCTACAAGAAAGTTGTAGTAACTTTAGGGCTAGCGATAACAGCCAATCCTTT
AATGGCGGTCACCTCTCCTGCAACAGGCATTACTGAGACTAAAGGTTTGGTTATTCAGATCATTGCTGTTTTAGCGATCG
TAGGTGGTTGCGCTCTAGGGGTCAAAGGCATAGCAGATATTTGGAAAATCTCTGATGACATCAAAAGAGGTCAGGCGACT
GTTTTTGCTTATGCACAGCCCATAGCTATGTTAGCGGTGGCAGGCGGTATTATCTTTTTGAGCGCTAAGTTTGGCTTCAA
TATTGGCGAAAGTGGAGGAGCTAGCTAA

Protein sequence : 
MKFLTRITDSYKKVVVTLGLAITANPLMAVTSPATGITETKGLVIQIIAVLAIVGGCALGVKGIADIWKISDDIKRGQAT
VFAYAQPIAMLAVAGGIIFLSAKFGFNIGESGGAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0546 BAD14017.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-39 95
HP0546 BAD13879.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-38 94
HP0546 BAD13907.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-39 94
cagC YP_005775746.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-38 94
HP0546 BAD13798.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-39 94
cagC YP_005774525.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-38 94
cagC YP_005779047.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-39 94
HP0546 BAD14071.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-39 94
HP0546 BAD13934.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-38 94
cagC NP_223212.1 cag island protein Virulence cag PAI Protein 1e-32 93
HP0546 BAD14044.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-38 93
cag25 AAR03880.1 Cag25 Virulence cag PAI Protein 1e-37 93
cagC YP_003728718.1 cag pathogenicity island protein C Virulence cag PAI Protein 4e-28 93
cagC AGC69805.1 cag pathogenicity island protein C Virulence cag PAI Protein 9e-38 93
HP0546 NP_207342.1 cag pathogenicity island protein (cag25) Virulence cag PAI Protein 3e-32 92
cag25 AAR03908.1 Cag25 Virulence cag PAI Protein 2e-32 91
cagC YP_005777287.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-37 91
cag25 AAR03938.1 Cag25 Virulence cag PAI Protein 2e-32 91
HP0546 BAD13962.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-38 90
cag25 AAR03969.1 Cag25 Virulence cag PAI Protein 2e-32 90
cagC AAC44704.1 CagC Virulence cag PAI Protein 2e-31 89
HP0546 BAD13825.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-36 88
HP0546 BAD13852.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-32 88
HP0546 BAD13989.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-36 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPPN135_02695 YP_005789756.1 cag pathogenicity island protein C VFG0305 Protein 8e-33 92