Gene Information

Name : HPPN135_02670 (HPPN135_02670)
Accession : YP_005789751.1
Strain : Helicobacter pylori Puno135
Genome accession: NC_017379
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein H
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 530878 - 531990 bp
Length : 1113 bp
Strand : -
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence : 
ATGGCAGGCACACAAGCTATATATGAATCATCTTCTGCAGGCTTCTTATCGCAAGTCTCATCAGTCATCTCAAGCACAAG
TGGTGTTGCAGGGCCATTTGCAGGAATAGTGGCGGGTGCTATGACAGCAGCGATTATTCCTATTGTTGTGGCATTTACTA
ATCCGCAAATGACCGCTATCATGACACAATACAATCAGAGCATCGCTGAAGCCGTAAGCATGCCTATGAAAGCCGCTAAC
CAACAATACAACCAATTGTATCAAGGTTTTAACGATCAAAGCATGGCTGTGGGGAACAACATCTTAAATATTAGCAAATT
AACAGGGGAATTTAACGCGCAAGGCAACACGCAAGGCGCGCAAATTGGTGCTGTTAATAGTCAGATTGCAAGCATTTTAG
CGAGTAACACTACCCCTAAAAATCCTAGTGCTATTGAAGCTTATGCGACGAATCAAATCACTGTTCCTAGTGTGCCAACA
ACGGTTGAAATGATGAGCGCTATCTTAGGCAATATTACAAGTGCAGCACCGAAATACGCCCTAGCCCTACAAGAGCAACT
GCGTTCTCAAGCAAGCAACAGCTCAATGAATGATACAGCCGATTCCCTTGATAGCTGTACCGCTTTGGGTGCACTTGCTA
GCTCATCAAAAGTGTTTTTTAGTTGCATGCAAATTTCTATGACTCCTATGAGTGTCTCTATGCCCACTGTTTATGCCAAA
TACCAAGCGTTAGCCGCTAATGCCCTAACTTCAGGCGTTAATCCTATGACCACTCCTGCATGCCCTATTGGGGACAAAGT
TCTTGTCGTTTATTGCTATGCTGAAAAAGTAGCAGAAATTTTGAGAGAATACTATATAGAATTTGTGAAAAACAATACCA
ATTTGTTGCAAAACGCTTCTCAAATGATACTTAATCAATCAGGATTAGCTACTAGCACTTATGACACCCAAGCGATTTCT
AACATAAGCTCGCTATATAACTACAATATAGTAGCGAATAAATCTTTTTTGAAATCGCATCTGACTTATCTTGATTACAT
CAAAGACAAACTTAAGGGGCAAAAAGATAGCTACTTAACAGAAAGGGTGCAAACTAAAATAATCGTGAAGTGA

Protein sequence : 
MAGTQAIYESSSAGFLSQVSSVISSTSGVAGPFAGIVAGAMTAAIIPIVVAFTNPQMTAIMTQYNQSIAEAVSMPMKAAN
QQYNQLYQGFNDQSMAVGNNILNISKLTGEFNAQGNTQGAQIGAVNSQIASILASNTTPKNPSAIEAYATNQITVPSVPT
TVEMMSAILGNITSAAPKYALALQEQLRSQASNSSMNDTADSLDSCTALGALASSSKVFFSCMQISMTPMSVSMPTVYAK
YQALAANALTSGVNPMTTPACPIGDKVLVVYCYAEKVAEILREYYIEFVKNNTNLLQNASQMILNQSGLATSTYDTQAIS
NISSLYNYNIVANKSFLKSHLTYLDYIKDKLKGQKDSYLTERVQTKIIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0541 BAD13902.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-157 98
cagH YP_005774530.1 cag island protein Virulence cag PAI Protein 6e-157 98
HP0541 BAD14066.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-158 98
HP0541 BAD13847.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-158 98
cagH YP_005777282.1 cag island protein Virulence cag PAI Protein 8e-158 98
cagH AAC44699.1 CagH Virulence cag PAI Protein 6e-159 98
HP0541 BAD14012.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-157 98
cag20 AAR03903.1 Cag20 Virulence cag PAI Protein 3e-157 97
cagH YP_005779052.1 cag island protein Virulence cag PAI Protein 2e-156 97
HP0541 BAD13957.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-157 97
HP0541 BAD13793.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-156 97
cagH YP_005775741.1 cag island protein Virulence cag PAI Protein 1e-156 97
HP0541 BAD13874.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-157 97
HP0541 BAD13929.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-157 97
cag20 AAR03875.1 Cag20 Virulence cag PAI Protein 7e-157 97
cagH YP_003728723.1 cag pathogenicity island protein H Virulence cag PAI Protein 4e-157 97
cag20 AAR03933.1 Cag20 Virulence cag PAI Protein 7e-157 97
cagH NP_223207.1 cag island protein Virulence cag PAI Protein 4e-157 97
cagH AGC69803.1 cag pathogenicity island protein H Virulence cag PAI Protein 7e-157 97
HP0541 BAD13820.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-156 96
HP0541 BAD13984.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-157 96
HP0541 BAD14039.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-155 96
cag20 AAR03964.1 Cag20 Virulence cag PAI Protein 6e-156 96
HP0541 NP_207337.1 cag pathogenicity island protein (cag20) Virulence cag PAI Protein 8e-156 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPPN135_02670 YP_005789751.1 cag pathogenicity island protein H VFG0300 Protein 3e-156 96