Gene Information

Name : HPPN135_02665 (HPPN135_02665)
Accession : YP_005789750.1
Strain : Helicobacter pylori Puno135
Genome accession: NC_017379
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 529728 - 530867 bp
Length : 1140 bp
Strand : -
Note : CagI; Cag19

DNA sequence : 
GTGAAGTGTTTTTTAAGCATATTTTCTTTCTTAACTTTTTTGTTTCTGAATGGTGGAGAGGTAGTAATAACGCTTGAACC
TGCCTTAAAAGCCATTCAAGCGGATGCACAAGCCAAACAAAAAACCGCTCAAGCCGAATTAAAAGCCATAGAGGCTCAAT
CTAATGCCAAAGAAAAAGCCATTCAAGCGCAAATAGAGGGAGAATTGAGGACTCAGCTTGCAACTATGAGCGCTATGTTA
AAAGGGGCTAATGGCGTTATTAATGGTGTCAATGGCATGACAGGGGGGTTTTTTGCAGGTTCAGACATCTTGCTTGGCAT
CATGCAAGGGTATTCAAGCGCGCTTAGCGCATTGGGGGGAAATGTCAAAATGATCGTGGAAAAACAAAAAATTAATACCC
AAACAGAAATCCAAAACATGCAAATCGCGCTCCAAAAAAATAACGAAATGATCAAGCTCAAAATGAACCAGCAAAACGCT
CTCTTAGAAGCGTTAAAAAACAGCTTTGAACCGAGCGTTACCCTAAAAACACAAATGGAAATGCTTTCTCAAGCTCTAGG
AAGTTCTTCTGACAACACTAAATACATCGCTTACAATACGATTGGTATCAAGGCGTTTGAAGAAACCTTAAAAGGTTTTG
AAACATGGTTGAAAGTGGCTATGCAAAAAGCGACCCTTATTGACTACAATTCCCTAACAGGTCAGGCTTTGTTTCAAAGC
GCCATCTACGAGCCTGCTCTTAGTTTTTTTTCAAGCATGGGTGCACCATTTGGAATCATTGAAACGTTTACTCTAGCACC
CACAAAATGCCCCTATCTTGATGGGCTAAAAATTTCAGCATGCCTTATGGAACAGGTTATTCAGAATTACAGAAAGATTG
TAGCCCTTATTCAAAATAAACTGAATGATGCAGATTTTCAAAATATCGCTTATTTGAATGGGATCAATGAAGAAATCAAA
ACCTTAAAAGGATCAGTAGATTTGAATGCGCTCATAGAAGTTGCTATCTTAAACGCAGAAAATCATTTAAACTATATAGA
GAATCTTGAAAAAAAAGCCGACCTTTGGGAAGAACAACTGAAATTAGAGAGAGAAACGACAGCAAGAAACATTGCTAGCT
CTAAAGTTATTGTCAAATGA

Protein sequence : 
MKCFLSIFSFLTFLFLNGGEVVITLEPALKAIQADAQAKQKTAQAELKAIEAQSNAKEKAIQAQIEGELRTQLATMSAML
KGANGVINGVNGMTGGFFAGSDILLGIMQGYSSALSALGGNVKMIVEKQKINTQTEIQNMQIALQKNNEMIKLKMNQQNA
LLEALKNSFEPSVTLKTQMEMLSQALGSSSDNTKYIAYNTIGIKAFEETLKGFETWLKVAMQKATLIDYNSLTGQALFQS
AIYEPALSFFSSMGAPFGIIETFTLAPTKCPYLDGLKISACLMEQVIQNYRKIVALIQNKLNDADFQNIAYLNGINEEIK
TLKGSVDLNALIEVAILNAENHLNYIENLEKKADLWEEQLKLERETTARNIASSKVIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0540 BAD14038.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-148 98
cagI YP_005774531.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-148 97
cagI YP_005777281.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-146 97
cag19 AAR03902.1 Cag19 Virulence cag PAI Protein 1e-147 97
HP0540 BAD13873.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-148 97
cagI YP_005775740.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-147 97
cag19 AAR03963.1 Cag19 Virulence cag PAI Protein 8e-148 97
cagI YP_003728724.1 cag pathogenicity island protein I Virulence cag PAI Protein 1e-147 97
cagI AAF80208.1 CagI Virulence cag PAI Protein 4e-148 97
HP0540 NP_207336.1 cag pathogenicity island protein (cag19) Virulence cag PAI Protein 6e-148 97
cagI AGC69802.1 cag pathogenicity island protein I Virulence cag PAI Protein 3e-147 97
HP0540 BAD13956.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-148 97
HP0540 BAD13901.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-147 96
HP0540 BAD13928.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-146 96
cagI NP_223206.1 cag island protein Virulence cag PAI Protein 2e-146 96
cag19 AAR03932.1 Cag19 Virulence cag PAI Protein 3e-147 96
HP0540 BAD13819.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-146 96
HP0540 BAD14065.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-146 96
cagI YP_005779053.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-147 96
HP0540 BAD14011.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-146 96
HP0540 BAD13846.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-146 96
HP0540 BAD13792.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-147 96
cag19 AAR03874.1 Cag19 Virulence cag PAI Protein 4e-147 96
HP0540 BAD13983.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-142 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPPN135_02665 YP_005789750.1 cag pathogenicity island protein VFG0299 Protein 3e-148 97