Gene Information

Name : HPPN135_02655 (HPPN135_02655)
Accession : YP_005789748.1
Strain : Helicobacter pylori Puno135
Genome accession: NC_017379
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 528030 - 528941 bp
Length : 912 bp
Strand : +
Note : CagN; Cag17

DNA sequence : 
TTGAAAAGTATCTTCAAAAAGCTAGGTTCTGTCGCTCTTTATTTTTTAGTTATTTATGGGGGCTTAAACGCTATCAATAC
AGCATTATTACCGAGTGAATACAAAAAATTAGTGGCTTTAGGCTTTAAAAAACTCTATCAAAGACATGACGACAAAGAAG
TTACAGAAGAGGAAAAAAAATTCGCCATTAACGCTTTGAGAGAAAAATTACGAAATGATAGGGCGAGAGCGGAGCAAATT
CAAAAAAATATTGAAGCGTTTGAAAAAAAGAACAACTCTTCTATTCAAAAAAAAGCGACTAAGCACAAAGGATTACAAGA
ATTAAACGAAACTAACGCTAACCCTTTGAATGGCAATCCTAATAGTAATTCTTCCACTGAAACCAAATCTAATAAAGATG
ATAACTTTGATGAGATGATCAATAAGGTGAATAAAGCTTTTGTGAAACCTGCTACTCCGCTTGTGCCTAATGAGTGGAGA
ACGCCTGAAATTGAAACCATTATCAATGAGTGCATTATTTCAAGCAACGATTACGATGGGTTAAGAAAGTGTTTGATCAA
AGGCATCAAGGATCAAAAAATTCTTGCCCCCTTATTAGAAAAAATTCAAGAAATAGAGACAGAAAATAACAAGTTTTCTA
GACAACACTTGAGTGGTTTAAAGCTCGCTCTTAATAACAGCAACAATAGAACCTTTCTTATAGCTTCGTGTGCTATTTGT
GAGAAGAGAAAAAAAGAAATGGAGCAAGAAAATAACTACCAAGATACTACAAATGCAAGTGAGTTTGGAGCTACTGATAC
AAAAAAAAATGAAGCAAAAGATGCAGCATTCTCAAACAATCGCTCTAAATCTGAACTGCCCAATAGCGTCATTAATCAAA
TAGAACAAAGCATCGCACATGGAAAAAAATAG

Protein sequence : 
MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKLYQRHDDKEVTEEEKKFAINALREKLRNDRARAEQI
QKNIEAFEKKNNSSIQKKATKHKGLQELNETNANPLNGNPNSNSSTETKSNKDDNFDEMINKVNKAFVKPATPLVPNEWR
TPEIETIINECIISSNDYDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASCAIC
EKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDAAFSNNRSKSELPNSVINQIEQSIAHGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0538 BAD14063.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-106 96
HP0538 BAD13981.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-113 96
HP0538 BAD13954.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-106 96
HP0538 BAD13817.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-106 95
HP0538 NP_207334.1 cag pathogenicity island protein (cag17) Virulence cag PAI Protein 5e-110 95
cagN YP_005774533.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-110 95
HP0538 BAD13790.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-105 95
cagN YP_005779055.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-105 95
HP0538 BAD13899.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-105 95
cagN YP_005777279.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-106 95
HP0538 BAD14009.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-106 95
HP0538 BAD13844.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-106 95
cag17 AAR03961.1 Cag17 Virulence cag PAI Protein 4e-112 95
HP0538 BAD13871.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-108 94
HP0538 ABC25004.1 cag pathogenicity island protein N Virulence cag PAI Protein 2e-105 94
cagN YP_005775738.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-108 94
cagN YP_003728726.1 cag pathogenicity island protein N Virulence cag PAI Protein 5e-110 94
cag17 AAR03900.1 Cag17 Virulence cag PAI Protein 2e-109 94
cag17 AAR03872.1 Cag17 Virulence cag PAI Protein 2e-109 94
HP0538 BAD14036.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-111 93
cag17 AAR03930.1 Cag17 Virulence cag PAI Protein 4e-110 93
cagN NP_223204.1 cag island protein Virulence cag PAI Protein 5e-110 92
HP0538 BAD13926.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-115 92
cagN AAF80207.2 CagN Virulence cag PAI Protein 4e-110 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPPN135_02655 YP_005789748.1 cag pathogenicity island protein VFG0297 Protein 2e-110 95