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Name : ureB (HPPN135_05410) Accession : YP_005790265.1 Strain : Helicobacter pylori Puno135 Genome accession: NC_017379 Putative virulence/resistance : Virulence Product : urease subunit beta Function : - COG functional category : - COG ID : - EC number : 3.5.1.5 Position : 1108810 - 1110513 bp Length : 1704 bp Strand : + Note : COG0804 Urea amidohydrolase (urease) alpha subunit DNA sequence : ATGAAAAAACTTGATTATGTCAATACTTACGGGCCCACTAAAGGGGATAAAGTAAGATTAGGCGATACAGATCTTTGGGC AGAAGTGGAGCATGATTACACTATCTATGGTGAAGAGTTAAAATTTGGTGCAGGCAAGACCATCAGAGAATGCATGGGGC AAAGCAACAGCCATGACGAGAACACCTTAGATCTAGTGATCACCAACGCTCTCATTATTGATTACACCGGCATTTACAAA GCTGATATTGGGATTAAAAACGGCAAGATTGCAGGCATTGGTAAAGCAGGCAATAAGGACATGCAAGATGGCGTCAGCCC TAATTTAGTCGTAGGTGTAGGCACAGAAGCTTTAGCGGGTGAAGGCATGATTGTAACCGCTGGTGGGATTGATAGCCACA CGCATTTTTTAAGTCCTCAACAATTCCCCACAGCTCTAGCTAATGGCGTGACCACGATGTTTGGCGGTGGTACTGGCCCG GTAGATGGCACGAATGCGACCACTATCACTCCAGGAGAATGGAATATCCACAGAATGTTAAGAGCCGCTGAAGAATACGC CATGAATGTGGGGTTTTTAGGGAAAGGGAATTCTTCTAGCAAAACCCAATTAGTGGAACAAATTGAAGCGGGTATTGTAG GCTTTAAATTGCACGAAGATTGGGGTACCACTCCTAGCGCGATTGATACATGCTTAAGCGTCGCTGATGAATACGATGTG CAAGTGTGCATCCATACAGACACCGTGAATGAAGCCGGGTATGTGGAAGACACGCTCAATGCAATGAACGGACGCGCTAT CCATGCATACCACATTGAAGGGGCAGGTGGAGGACATAGCCCAGATGTTATCACTATGGCCGGTGAAGAAAACATCTTAC CCAGTTCCACCACCCCAACCATTCCTTATACCATAAATACGGTTGCAGAACACTTAGACATGCTAATGACATGCCATCAT TTGGATAAAAAAATCCGAGAAGATTTACAATTTTCCCAAAGCCGTATCCGCCCGGGTAGCATTGCAGCTGAAGATGTTTT GCATGACAATGGCATGATCGCTATGACAAGTTCGGATTCTCAAGCGATAGGGAGAGCGGGTGAAGTCGTTCCCAGAACAT GGCAAACCGCTGACAAAAACAAGAAAGAGTTTGGCCCTTTAAAAGAATACGATCAAAATGGGAATGATAATTTCCGCATC AAACGCTACATTTCTAAATACACCATCAACCCGGCTATTACGCACGGCGTGAGCGAATACATCGGCTCTGTGGAAGCGGG GAAAATCGCTGATTTAGTCGTGTGGAATCCGGCCTTTTTTGGGGTGAAACCTAAAATCATCATTAAAGGCGGTTTGGTCG TGTTCTCTGAAATGGGCGATAGCAACGCTTCTGTGCCAACCCCACAACCTGTTTATTACAGAGAAATGTTTGGCCATCAT GGGAAGGCTAAATTTGACACGAGCATCACTTTTGTCAATAAGCTCGCCTATGAAAAGGGCATTAAAGAAAAACTTGGCTT AGAAAGACAAGTATTGCCCATCAAAAATGTGCGCAACATCACTAAAAAAGACTTTAAATTCAACAACACGATAGGAAAAC TCACCGTCGATCCCAAAACCTTTGAAGTCTTTTTAGATGGCAAGCTTTGCACTTCCAAGCCAGCGAGCGAATTGCCTTTA GCGCAACGCTACACTTTCTTTTAG Protein sequence : MKKLDYVNTYGPTKGDKVRLGDTDLWAEVEHDYTIYGEELKFGAGKTIRECMGQSNSHDENTLDLVITNALIIDYTGIYK ADIGIKNGKIAGIGKAGNKDMQDGVSPNLVVGVGTEALAGEGMIVTAGGIDSHTHFLSPQQFPTALANGVTTMFGGGTGP VDGTNATTITPGEWNIHRMLRAAEEYAMNVGFLGKGNSSSKTQLVEQIEAGIVGFKLHEDWGTTPSAIDTCLSVADEYDV QVCIHTDTVNEAGYVEDTLNAMNGRAIHAYHIEGAGGGHSPDVITMAGEENILPSSTTPTIPYTINTVAEHLDMLMTCHH LDKKIREDLQFSQSRIRPGSIAAEDVLHDNGMIAMTSSDSQAIGRAGEVVPRTWQTADKNKKEFGPLKEYDQNGNDNFRI KRYISKYTINPAITHGVSEYIGSVEAGKIADLVVWNPAFFGVKPKIIIKGGLVVFSEMGDSNASVPTPQPVYYREMFGHH GKAKFDTSITFVNKLAYEKGIKEKLGLERQVLPIKNVRNITKKDFKFNNTIGKLTVDPKTFEVFLDGKLCTSKPASELPL AQRYTFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-137 | 58 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 3e-137 | 58 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-137 | 58 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-137 | 58 |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 1e-141 | 57 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 1e-141 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureB | YP_005790265.1 | urease subunit beta | VFG0270 | Protein | 0.0 | 73 |
