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Name : HPSNT_04525 (HPSNT_04525) Accession : YP_005787036.1 Strain : Helicobacter pylori Santal49 Genome accession: NC_017376 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 917250 - 918767 bp Length : 1518 bp Strand : - Note : COG0753 Catalase DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACTGCTTTTGGCGCTCCCGTTTGGGATGACAACAATGTGATTACGGCTGGTCC TAGAGGTCCTGTTTTATTACAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGACAGAGAAAGAATCCCTGAAAGGG TGGTGCATGCTAAAGGAAGCGGGGCTTATGGCACTTTCACTGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACAGAATGCTTTTTCAGATTTTCCACTGTGGCTGGTGAAAGAGGCAGTGCGGATGCGGT AAGAGACCCTAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGTAACTGGGATTTAGTAGGGAACAACACGCCCGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTCATCCACACTCAAAAACGAGATCCTCAAACCAATTTGCCTAACCAC GACATGGTGTGGGATTTTTGGAGTAATGTTCCTGAAAGCTTATACCAAGTAACATGGGTTATGAGCGATAGAGGGATCCC TAAATCTTTCCGCCACATGGATGGTTTTGGCAGCCACACTTTCAGTCTCATCAACGCGAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTCACACCATGCAAGGCGTTAAGCACTTGACTAACGAAGAAGCTGCAGAAATCAGAAAGCATGATCCTGAT TCCAATCAAAGGGATTTATTCGATGCGATCGCTAGAGGGGATTTCCCAAAATGGAAATTAAGCATTCAAGTGATGCCAGA AGAGGATGCTAAGAAGTATCGATTCCATCCGTTTGATGTAACTAAAATTTGGTATCTCCAAGATTACCCGTTGATGGAAG TGGGCATTGTAGAGTTGAATAAAAATCCTGAAAACTATTTCGCAGAAGTGGAGCAAGCGGCATTCAGTCCGGCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGATAGGATGTTACAAGGGCGCTTGTTCTCTTATGGGGACACACACCGCTACCGCTT AGGCGTTAATTATCCTCAAATACCGGTTAATAAACCAAGATGCCCATTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ACGGGTATTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCTGGCTATAAAGAAGATAAGAGTGCGAGGGATCCT AAGTTCAACTTAGCTCATATTGAGAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGATGATAGCGATTACTACAC CCAACCAGGTGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGCATGACACTATTGGAGAGTCTTTAGCTC ATGTTACCCATAAGGAAATTGTGGATAAACAATTGGAGCATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGGAAAAGACATGCACCACACGAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNH DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEIRKHDPD SNQRDLFDAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFSPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHGKDMHHTKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 1e-135 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 2e-92 | 51 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 3e-90 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 3e-90 | 47 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 3e-90 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 3e-90 | 47 |
