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Name : HPSNT_00440 (HPSNT_00440) Accession : YP_005786254.1 Strain : Helicobacter pylori Santal49 Genome accession: NC_017376 Putative virulence/resistance : Virulence Product : conjugal plasmid transfer system protein Function : - COG functional category : - COG ID : - EC number : - Position : 90246 - 91787 bp Length : 1542 bp Strand : - Note : COG3504 Type IV secretory pathway, VirB9 components DNA sequence : ATGAAAAAATTCACTCTATCGCTATTTTTGTATTGCACTTTACTTAGTGCTGAAGAGGATATTTTTAGAAACAATACCAA TGAAACCGATCCTACAAGTTCTTTTGAACATGGCAAAGAAAACAACAATCTTATCCCAGCAAAATCTGATAGTTTAGAAA GTTTCAAAGAACAAGAAAACAAAGAAAAAGCCAAACAGCTTATGGATTTAAAAGCCTTACAGAGCGTGTATTTTTCTAAA AGTAGAAAATTGCAAGACAATAACTTCAACGTCTTATATGTGGCAGGCAACACCAACAAAATCCGCTTACGCTATGCGAT GACTACCACTTTTATTTTTGATAATGATCCTATTATCTATGTGAGCTTAGGAGATCCTAGCGGTTTTGAACTCACTTACC CTACTAATGATCATTACGATTTATCCAACATGCTAGTGATCAAACCCTTGCTTATAGGAGTGGATACAAACCTAACCGTA GTCGGAGCGAGCGGAACAATTTATACTTTTTATTTGTTTAGCACCACTTACACCAGCAAATTTCAAAGTTATTTTTCAGT GTTTGTCTCTAATAAAAGGGCTATCGGTAAGCTCAATATTTTGTCTAAAAACGAGCTAGAAAAAAGAGAGCAAGAACAAT GGGCTAAAACAGAAACAAATACAAATAGCTCCAATAAACAAGACAAACAAAAGCTTGATTATAGAAAAATCAATTATGAG AGCAAGGAAATTGATGATGGCAAGTTTATAAGAATTGGAGATGAAGTCAATCACATTTTCATTGAAAAAGCTAAAATCAA TCGTGGTTATTTGCAAAAACCCAAACACAAACGCACCTGGTGGAGTTTGTGGCTCTATAAAAAACCCAGTGATGATGCGC TTGATATAAAAGCGCTAGATGTCTTTGATGATGGCAAATACACTTATTTTAGATATGACAGAGATCAAGCCTTTTCAAAA TTTCCTTACACCTATAAGGTTGTAGATGGGTATGATAATCCTATCAATAGCCGTGTGGTAGGGAATTACATTATTGCTGA AGATGTTTCTAAAAAATGGACTTTAAGGAGCGGTAAGGAATATGTGTGCGTAAGGAGAGATAAGCACAAATACCAAAAAT CTAAGGACTTCATGCGTTTAAAAAGGCTTTTAGAGCAAGATGAAGCCATGAAAGCCAAACGAAACAACATTCACTTGATT GAAGACACTACGCCTCAACCTAAAAATGCCATTAGTGTAACGGAGTTGTTAGCTCAAATCAAAAACCAAACTCCAAATGA AAAATGCCGAGCCTTAAATGAAGAAGAAGTTAAGACTTTAGAAGAGGTTAAAAACATCATAAAAGCTCCCAAGCCTTTGC AAAAAGATTTGAAAAACAAGCTCAAAAAACACACAATCAAAACCCATTATTGCGTGCCTATCCCCTATATAGAAAGACCA AAAACCACTGATAGTTTAGAGAAGAATAAAAAGGGGCTGGATAACACCCCAAAACAAAATCAAGCGAACCCTATTAAAGA GATTAAAGAAAACAAGAAATGA Protein sequence : MKKFTLSLFLYCTLLSAEEDIFRNNTNETDPTSSFEHGKENNNLIPAKSDSLESFKEQENKEKAKQLMDLKALQSVYFSK SRKLQDNNFNVLYVAGNTNKIRLRYAMTTTFIFDNDPIIYVSLGDPSGFELTYPTNDHYDLSNMLVIKPLLIGVDTNLTV VGASGTIYTFYLFSTTYTSKFQSYFSVFVSNKRAIGKLNILSKNELEKREQEQWAKTETNTNSSNKQDKQKLDYRKINYE SKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQKPKHKRTWWSLWLYKKPSDDALDIKALDVFDDGKYTYFRYDRDQAFSK FPYTYKVVDGYDNPINSRVVGNYIIAEDVSKKWTLRSGKEYVCVRRDKHKYQKSKDFMRLKRLLEQDEAMKAKRNNIHLI EDTTPQPKNAISVTELLAQIKNQTPNEKCRALNEEEVKTLEEVKNIIKAPKPLQKDLKNKLKKHTIKTHYCVPIPYIERP KTTDSLEKNKKGLDNTPKQNQANPIKEIKENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB9-1 | YP_002301099.1 | VirB9 type IV secretion protein | Virulence | cag PAI | Protein | 0.0 | 99 |
