|
Name : HPSNT_04260 (HPSNT_04260) Accession : YP_005786983.1 Strain : Helicobacter pylori Santal49 Genome accession: NC_017376 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.1.1.3 Position : 868341 - 869606 bp Length : 1266 bp Strand : + Note : COG0460 Homoserine dehydrogenase DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGCGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATTAAAGACAGAGCCGGTGTGGAAATTATGATTAAAAAAGCGGTGGTGCGAGACGTGAAAAAACACAAAGGCT ATCCCTTTGAAATCAGTAATGATTTAGAAAGCCTGATAGAAGATGAAGAGATTGATATTGTCGTGGAGCTTATGGGTGGG GTGGAAGCACCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCCTTCATTACAGCCAATAAAGCCATGTTAGC GTATCACCGCTATGAATTAGAGCAAATCGCTAAAAACACCCCCATAGGCTTTGAGGCGAGCGTGTGTGGGGGTATCCCTA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCTAATCACATTCTTTCTTTTAAAGGGATTTTAAACGGCACGAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGACGCACAACATTTAGGCTATGCGGAATT AAACCCTGAATTTGACATCAAAGGCATTGATGCGGCGCACAAATTATTGATTTTAGCGTCTTTAGCGTATGGCATTGATG CGAAATTAGAAGAAATCTTAATTGAAGGCATTGAAAAAATAGAGCCAGACGACATGGAGTTTGCTAAAGAATTTGGTTAT AGCATTAAACTTTTAGGCATCGCTAAAAAACACCCAGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAATGA ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCTATAAGCGTTATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACCGCAAGTGCGGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTTTA ATGCTAGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGTGCGTTTGTT AGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATTAGCGCGATTTTAGCTAAAAATGATATTTCGCTCAACAATGTCTTAC AAAAAGAAATCCCGCATTCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAGTCTATGCTGAACGCC CTTAAAGAGCTTGAAAATCTACAAAGCGTGTTGGACACCCCTAAAATGATCCGTTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVEIMIKKAVVRDVKKHKGYPFEISNDLESLIEDEEIDIVVELMGG VEAPYLLAKKTLAKQKAFITANKAMLAYHRYELEQIAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHPDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYVRLLVSDEKGVFSQISAILAKNDISLNNVLQKEIPHSNKAKILFSTHTTNEKSMLNA LKELENLQSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 4e-62 | 41 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 4e-62 | 41 |
