Gene Information

Name : HPSNT_02780 (HPSNT_02780)
Accession : YP_005786696.1
Strain : Helicobacter pylori Santal49
Genome accession: NC_017376
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 563513 - 564658 bp
Length : 1146 bp
Strand : -
Note : -

DNA sequence : 
GTGAAATGTTTTTTAAGCATATTTTCTTTCTTAACTTTTTGTGGCTTGTCTCTGAATGGTGGAGAGGCAGTAATAACGCT
TGAACCTGCCTTAAAAGCCATTCAGGCGGATGCACAGGCTAAACAAAAAACCGCTCAAGCCGAATTAAAAGCCATAGAAG
CTCAATCTAGTGCCAAAGAAAAAGCCATTCAAGCGCAAATAGAGGGAGAATTGAGAACTCAGCTTGCAACTATGAGCGCT
ATGTTAAAAGGGGCTAATGGCGTTATTAATGGTGTCAATAGCATGACAGGGGGGTTTTTTGCAGGTTCAGACATCTTGCT
TGGCGTCATGGAAGGGTATTCAAGCGCGCTTAGCGCATTGGGGGGGAATGTCAAAATGATCGTGGAAAAACAAAAAATTA
ATACCCAAACAGAAATCCAAAACATGCAAATTGCGCTCCAAAAAAATAACGAAATAATCAAGCTCAAAATGAACCAGCAA
AACGCTCTCTTAGAAGCGTTAAAAAACAGCTTTGAACCGAGCGTTACTCTAAAAACACAAATGGAAATGCTTTCTCAAGC
TTTAGGAAGTTCTTCTGATAACGCTAAATACATCACTTACAATACGATCGGCATCAAGACGTTTGAAGAAACCTTAGAAG
GTTTTGAAACATGGTTGAAAGAGGCTATGAAAAAAGCGACCCTTATTGACTATAATTCCCTAACAGGTCAGGCTTTGTTT
CAAAGTGCCATCTATGCGCCTGCTCTTAGTTTTTTTTCAAGCATGGGTGCACCATTTGGAATCATTGAAACATTTACTCT
AGTACCCACAAAATGCCCCTATCTTGATGGGCTAAAAATTTCAGCATGCCTTATGGAACAGGTTATTCAGAATTACAGAA
TGATTGTAGCCCTTATTCAAAATAAACTGAGTGATGCAGATTTTCAAAATATCGCTTATTTGAATGGGATCAATGGAGAA
ATCAAAACCTTAAAAGGATCAGTAGATTTGAACGCGCTCATAGAAGTTGCTATCTTAAACGCAGAAAATCATTTAAACTA
TATAGAGAATCTTGAAAAAAAAGCCGACCTTTGGGAAGAACAACTGAAATTAGAAAGAGAAACGACAGCAAGAAACATTG
CTAGCTCTAAAGTTATTGTCAAATGA

Protein sequence : 
MKCFLSIFSFLTFCGLSLNGGEAVITLEPALKAIQADAQAKQKTAQAELKAIEAQSSAKEKAIQAQIEGELRTQLATMSA
MLKGANGVINGVNSMTGGFFAGSDILLGVMEGYSSALSALGGNVKMIVEKQKINTQTEIQNMQIALQKNNEIIKLKMNQQ
NALLEALKNSFEPSVTLKTQMEMLSQALGSSSDNAKYITYNTIGIKTFEETLEGFETWLKEAMKKATLIDYNSLTGQALF
QSAIYAPALSFFSSMGAPFGIIETFTLVPTKCPYLDGLKISACLMEQVIQNYRMIVALIQNKLSDADFQNIAYLNGINGE
IKTLKGSVDLNALIEVAILNAENHLNYIENLEKKADLWEEQLKLERETTARNIASSKVIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0540 BAD13873.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-158 98
cagI YP_005775740.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-158 98
HP0540 BAD14038.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-159 98
cagI AAF80208.1 CagI Virulence cag PAI Protein 6e-158 98
cagI AGC69802.1 cag pathogenicity island protein I Virulence cag PAI Protein 4e-158 98
HP0540 NP_207336.1 cag pathogenicity island protein (cag19) Virulence cag PAI Protein 6e-158 98
HP0540 BAD13928.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-158 98
cagI NP_223206.1 cag island protein Virulence cag PAI Protein 4e-158 98
cag19 AAR03963.1 Cag19 Virulence cag PAI Protein 2e-158 98
cagI YP_003728724.1 cag pathogenicity island protein I Virulence cag PAI Protein 2e-158 98
HP0540 BAD13956.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-157 97
cag19 AAR03932.1 Cag19 Virulence cag PAI Protein 1e-157 97
cag19 AAR03902.1 Cag19 Virulence cag PAI Protein 8e-158 97
cag19 AAR03874.1 Cag19 Virulence cag PAI Protein 8e-158 97
HP0540 BAD13983.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-154 97
cagI YP_005779053.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-154 96
HP0540 BAD13792.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-154 96
HP0540 BAD14011.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-153 95
cagI YP_005774531.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-148 95
HP0540 BAD13901.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-154 95
cagI YP_005777281.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-154 95
HP0540 BAD13819.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-154 95
HP0540 BAD13846.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-154 95
HP0540 BAD14065.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-153 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPSNT_02780 YP_005786696.1 cag pathogenicity island protein I VFG0299 Protein 3e-158 98