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Name : HPSNT_02715 (HPSNT_02715) Accession : YP_005786683.1 Strain : Helicobacter pylori Santal49 Genome accession: NC_017376 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein (cag7) Function : - COG functional category : - COG ID : - EC number : - Position : 545813 - 551206 bp Length : 5394 bp Strand : - Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGAATGAAGAAAACGATAAACTTGAAACTTCTCAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGC GACAGAAGTCAATCGCTTTGAAGATTCTTCAAAAGAATCCGAAGAAAATTCAGATCACCATCTTGACAACCCCACAGAAA CTAAAACCAATTTTGATGAATACGAGTCAGAAGAAACCCAAACTCAAATGGATTCTGGAGGTAATGAAACTTCAGAATCT AGCCATGGCAGTCTGGCAGACAAGTTATTCAAGAAAGCCAGAAAATTAGTTGATAATAAAAAACCTTTCACTCAGCAAAA GAATTTAGATGAAGAAACCCAAGAACTGAACGAAGAAGACGATCAAGAAAATAATGGGTATCAAGAAGAAACTCAAATAG ACTTAATTGATGATGAAACTTCTCAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCGACAGAAGTC AATCGCTTTGAAGATTCTTCAAAAGAATCCGAAGAAAATTCAGATCACCATCTTGACAACCCCACAGAAACTAAAACCAA TTTTGATGAATACAAGTCAGAAGAAATAACTAACGACTCTAACGATCAAGAGATTATCAAAGGAAGCAAAAAGAAATATA TTATTGGTGGCATTGTAGTCGCTGTTCTTATCGTGATTATTTTATTTTCTAGAAGCATTTTTCACTACTTCATGCCTTTG GAAGATAAAAGCTCTCGTTTTAGCAAAGACAGGAATCTTTATGTCAATGATGAAATCAAAATAAGGCAAGAATATAACCG ATTGCTGAAAGAACGGAATGAAAAAGGCAATATGATCGATAAGAATCTTTTCTTCAATGACGATCCCAATAGAACCTTAT ACAACTATTTGAATATTGCAGAAATTGAGGACAAAAACCCATTGAAAGCCTTTTATGAATGTATCAGTAATGGCGGCAAC TATGAAGAATGTTTGAAGCTTATCAAAGACAAAAAACTTCAAGATCAAATGAAAAAGACTCTAGAGGCTTATAATGACTG CATCAAAAATGCCAAAACTGAAGAAGAAAGGATCAAATGTCTAGATTTAATCAAAGATGAAAACCTGAAAAAAAGCTTAC TGAACCAACAAAAAGTTCAAGTGGCGCTAGATTGTTTGAAAAACGCTAAAACCGATGAAGAACGAAACGAGTGCCTAAAA CTCATAAATGACCCTGAGATCAGAGAGAAATTCCGTAAGGAATTAGGGCTTCAAAAAGAGCTTCAAGAGTATAAGGATTG TATCAAAAACGCCAAAACAGAAGCTGAGAAAAACGAATGCTTGAAAGGCTTGTCTAAAGAAGCTATAGAAAGATTGAAAC AGCAAGCTCTAGATTGTTTGAAAAACGCTAAAACCGATGAAGAACGAAACGAGTGCTTGAAAAATATTCCCCAAGACTTG CAAAAAGAACTACTAGCTGATATGAGCGTTAAGGCTTACAAGGATTGCGTATCAAAAGCTAGGAATGAAAAAGAGAAAAA AGAATGCGAGAAATTACTCACCCCTGAAGCGAAAAAAAAGTTAGAACAACAGGTTCTAGATTGTTTGAAAAACGCTAAAA CTGATGAAGAACGAAAAAAGTGTTTGAAAGATCTCCCTAAAGACTTACAAAGCGATATTTTAGCTAAAGAGAGTCTTAAA GCTTATAAAGACTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAA AAAACTTTTAGAAGAAGAAGCCAAAGAGAGCGTTAAGGCTTACTTGGATTGCGTATCTCAAGCCAAAAACGAAGCTGAGA AAAAAGAATGCGAAAAATTGCTCACCCCTGAAGCGAAAAAAAAGTTAGAAGAAGCTAAAAAAAGCGTTAAGGCTTACTTG GATTGCGTATCTCAAGCCAGAACTGAAGCTGAGAAAAAAGAATGCGAAAAATTACTCACCCCTGAAGCGAAAAAACTCTT AGAGCAACAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGATAAAAAAAGGTGTGTCAAAGATCTCCCTAAAG ACTTGCAGAAAAAGGTTTTAGCCAAAGAGAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCTGAG AAAAAAGAATGCGAGAAATTACTCACCCCTGAAGCGAGAAAACTCTTAGAAGAGGCTAAAGAGAGCGTTAAAGCTTATAA AGATTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAGAAAACTTT TAGAAGAAGAAGCCAAAGAAAGCGTTAAGGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAA TGCGAGAAATTACTCACCCCTGAAGCGAAAAAAAAGTTAGAAGAAGCTAAAAAAAGCGCTAAAGCTTATTTGGATTGCGT ATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTACTCACCCCTGAAGCGAGGAAACTCTTAGAGCAAC AAGCGCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGAGAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTGCAG AAAAAGGTTTTAGCTAAAGAGAGTCTTAAAGCTTATAAAGACTGCGTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGA ATGCGAAAAATTGCTCACCCCTGAAGCGAAAAAGCTTTTAGAAGAAGCTAAAAAAAGCGTTAAGGCTTATTTGGATTGCG TATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAGGAAACTCTTAGAAGAG GCTAAAGAGAGCCTGAAAGCTTATAAAGATTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAAAAATT GCTCACCCCTGAAGCGAAAAAACTCTTAGAGCAACAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGACGCTGAGAAAA AAAGGTGTGCCAAAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCCAAAGAGAGCGTTAAGGCTTATTTGGACTGT GTTTCAAGAGCTAGGAATGAAAAAGAAAGAAAAGCTTGCGAGAAATTGCTCACCCCTGAAGCGAAAAAACTTTTAGAAGA AGCCAAAGAGAGCCTGAAGGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAAT TACTCACCCCTGAAGCGAGAAAACTCTTAGAGCAAGAAGTTAAGAATAGCGTTAAGGCTTATTTGGATTGCGTTTCAAGA GCTAGGAATGAAAAAGAGAAACAAGAATGCGAGAAATTACTCACCCCTGAAGCGAGGAAATTTTTAGCGAAGCAAGTGCT AAGTTGTTTGGAAAAAGCTAAAAATGAAGAAGAAAGAAAAGCATGTCTTAAAAATCTCCCTAAAGACTTACAAGAAAATG TTTTAGCCAAAGAGAGCCTGAAGGCTTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAG AAATTACTCACCCCTGAAGCGAGAAAACTCTTAGAGCAAGAAGTTAAGAATAGCGTTAAGGCTTATTTGGATTGCGTTTC AAGAGCTAGGAATGAAAAAGAGAAACAAGAATGCGAGAAATTACTCACCCCTGAAGCGAGGAAATTTTTAGCGAAAGAAC TCCAACAAAAAGATAAAGCGATCAAAGATTGCTTGAAAAACGCCGATCCTAACGACAGAGCGGCTATTATGAAGTGTTTG GATGGTTTGAGCGATGAAGAGAAGCTCAAATATCTGCAAGAAGCTAGAGAAAAGGCTGTCTTGGATTGTTTGAAAACGGC TAGGACCGATGAAGAAAAAAGGAAATGCCAAAACCTTTATAGCGATTTGATCCAAGAAATCCAAAATAAAAGGACACAAA ATAAACAAAATCAATTGAGTAAAACAGAAAGATTGCATCAAGCAAGCGAGTGCTTGGATAACTTAGATGACCCTACCGAT CAACAAGCTATAGAGCAATGTTTAGAGGGCTTGAGCGATAGTGAAAGGGCGCTAATTCTAGGAATTAAACGACAAGCTGA TGAAGTGGATCTGATTTATAGCGATCTAAGAAACCGCAAAACCTTTGATAACATGGCGGCTAAAGGTTATCCGTTGTTGC CAATGGATTTCAAAAATGGCGGCGATATTGCCACTATTAACGCTACTAATGTTGATGCGGACAAAATAGCTAGCGATAAT CCTATTTATGCTTCCATAGAGCCTGATATTACCAAGCAATACGAAACAGAAAAAACCATTAAGGATAAGAATTTAGAAGC TAAATTGGCTAAGGCTTTAGGTGGCAATAAAAAAGATGACGATAAAGAAAAAAGTAAAAAATCCACAGCAGAAGCTAAAG CAGAAAGCAATAAGATAGACAAAGATGTCGCAGAAACTGCTAAGAATATCAGTGAAATCGCTCTTAAGAACAAAAAAGAA AAGAGTGGGGAATTTGTAGATGAAAATGGTAATCCCATTGATGACAAAAAGAAAGCAGAAAAACAAGATGAAACAAGCCC TGTCAAACAAGCCTTTATAGGCAAGAGTGATCCCACATTTGTTTTAGCGCAATACACCCCCATTGAAATCACTCTGACTT CTAAAGTAGATGCCACTCTCACAGGTATAGTGAGTGGGGTTGTAGCCAAAGATGTATGGAACATGAACGGCACTATGATC TTACTAGACAAAGGCACTAAGGTGTATGGGAATTATCAAAGCGTGAAAGGTGGCACACCCATTATGACACGCTTAATGAT AGTCTTTACTAAAGCCATTACGCCTGATGGTGTGATAATACCTCTAGCAAACGCTCAAGCAGCAGGCATGTTGGGTGAAG CAGGGGTAGATGGCTATGTGAATAATCACTTTATGAAGCGCATAGGCTTTGCTGTGATAGCAAGCGTGGTTAATAGCTTC TTACAAACTGCGCCTATCATAGCTCTAGATAAACTCATAGGCCTTGGCAAAGGTAGAAGTGAAAGGACACCTGAATTTAA TTACGCTTTGGGTCAAGCTATCAATGGCAGCATGCAAAGTTCAGCTCATATGTCTAATCAAATTCTAGGGCAACTGATGA ATATCCCCCCAAGTTTTTACAAAAACGAGGGTGATAGTATTAAGATTCTCACAATGGACGATATTGATTTTAGTGGCGTG TATGATGTTAAAATTACCAACAAATCTGTGGTAGATGAAATTATCAAACAAAGCACCAAAACTTTGTCTAGAGAACATGA AGAGATCACCACAAGCCCCAAAGGTGGCAATTAA Protein sequence : MNEENDKLETSQKTQQHSPQDLSNEEATEVNRFEDSSKESEENSDHHLDNPTETKTNFDEYESEETQTQMDSGGNETSES SHGSLADKLFKKARKLVDNKKPFTQQKNLDEETQELNEEDDQENNGYQEETQIDLIDDETSQKTQQHSPQDLSNEEATEV NRFEDSSKESEENSDHHLDNPTETKTNFDEYKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPL EDKSSRFSKDRNLYVNDEIKIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPLKAFYECISNGGN YEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLK LINDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQDL QKELLADMSVKAYKDCVSKARNEKEKKECEKLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLK AYKDCVSQAKTEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKNEAEKKECEKLLTPEAKKKLEEAKKSVKAYL DCVSQARTEAEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAE KKECEKLLTPEARKLLEEAKESVKAYKDCVSRARNEKEKKECEKLLTPEARKLLEEEAKESVKAYLDCVSQAKTEAEKKE CEKLLTPEAKKKLEEAKKSAKAYLDCVSQAKTEAEKKECEKLLTPEARKLLEQQALDCLKNAKTEAEKKRCVKDLPKDLQ KKVLAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKLLEE AKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEQQALDCLKNAKTDAEKKRCAKDLPKDLQKKVLAKESVKAYLDC VSRARNEKERKACEKLLTPEAKKLLEEAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKNSVKAYLDCVSR ARNEKEKQECEKLLTPEARKFLAKQVLSCLEKAKNEEERKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACE KLLTPEARKLLEQEVKNSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCL DGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQNLYSDLIQEIQNKRTQNKQNQLSKTERLHQASECLDNLDDPTD QQAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRNRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDN PIYASIEPDITKQYETEKTIKDKNLEAKLAKALGGNKKDDDKEKSKKSTAEAKAESNKIDKDVAETAKNISEIALKNKKE KSGEFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMI LLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSF LQTAPIIALDKLIGLGKGRSERTPEFNYALGQAINGSMQSSAHMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGV YDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HP0527 | BAD13970.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 97 |
| HP0527 | BAD13833.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 96 |
| cagY | YP_005777271.1 | cag pathogenicity island protein Y VirB10-like protein | Virulence | cag PAI | Protein | 0.0 | 96 |
| cagY | YP_005774542.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 96 |
| HP0527 | NP_207323.1 | cag pathogenicity island protein (cag7) | Virulence | cag PAI | Protein | 0.0 | 96 |
| HP0527 | BAD14052.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 96 |
| cagY | AGC69792.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 96 |
| HP0527 | BAD14026.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 95 |
| cagY | AGC69786.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 94 |
| cagY | AGC69789.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 94 |
| HP0527 | BAD13998.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 93 |
| HP0527 | BAD13888.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 93 |
| cagY | AGC69787.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 91 |
| HP0527 | BAD13860.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 87 |
| cagY | YP_005775730.1 | cag pathogenicity island protein Y VirB10-like protein | Virulence | cag PAI | Protein | 0.0 | 87 |
| HP0527 | BAD13915.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 86 |
| HP0527 | BAD13806.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 86 |
| orf13/14 | NP_223194.1 | cag island protein | Virulence | cag PAI | Protein | 0.0 | 85 |
| HP0527 | BAD13779.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| cagY | YP_005779063.1 | cag island protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPSNT_02715 | YP_005786683.1 | cag pathogenicity island protein (cag7) | VFG0287 | Protein | 0.0 | 96 |
