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Name : HPSNT_02630 (HPSNT_02630) Accession : YP_005786670.1 Strain : Helicobacter pylori Santal49 Genome accession: NC_017376 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 529885 - 531330 bp Length : 1446 bp Strand : - Note : COG0174 Glutamine synthetase DNA sequence : ATGGTAGTAAGAACTCAAAATAGTGAAAGCAAGATCAAAGAATTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCACATCGCTTATTCTTTTGGGGCTTTAACGCATGGCATGTTTA AAGAGGGGATTCCTTTTGATGCGAGTTCTTTTAAAGGCTGGCAAGACATTGAACACTCCGATATGATTTTAACCCCCGAT TTGGTGCGTTATTTCATTGACCCTTTTAGCGCGGATGTGAGCGTGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAGAAATGCCCCAGAAGTATCGCTAAAAAAGCCTTACAGCATTTAAGAGATTCAGGTTTGGGCGATGTGG CTTATTTTGGTGCAGAGAATGAATTTTTCATCTTTGATTCCATTAAAATTAAAGACGCTTCCAATTCCCAATACTACGAA GTGGATAGCGAAGAGGGCGAATGGAATAGAGATAAGAGCTTTGAAAATGGCGTGAATTTTGGCCATAGACCAGGCAGGCA AGGGGGCTATATGCCTGTGCCGCCAACGGATACAATGATGGATATTCGCACTGAAATTGTGAAAGTCTTAAACCAAGTGG GGTTAGAAACTTTTGTCGTCCATCATGAAGTCGCGCAAGCGCAAGGCGAAGTGGGCGTGAAATTTGGGGATTTAGTGGAA GCCGCTGACAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCCCATTTAAACGGCAAAACCGCCACTTTCATGCC AAAACCTTTATACGGGGATAACGGGAGCGGGATGCACACCCATGTGAGCGTTTGGAAAAACAACGAAAACCTTTTTAGCG GCGAAACTTACAAGGGCTTGAGTGAGTTGGCGTTGCATTTTTTAGGGGGCGTGTTGCGCCACGCTAGAGGGTTAGCCGCT TTCACTAACGCTTCCACTAATTCTTACAAACGCTTAATTCCAGGCTATGAAGCCCCATCTATTTTGACTTATTCGGCTAA TAACAGGAGCGCGAGCGTGCGCATCCCTTATGGGATTTCTAAAAACAGCGCGAGGTTTGAATTCAGATTCCCGGATAGCT CATCAAACCCCTACTTGGCTTTTTCAGCGATTTTAATGGCAGGTATGGATGGCGTTAAAAACAAGATTGATCCCGGCGAA GCGATGGATATTAACCTTTTCAAATTGACTTTAGATGAAATCAGAGAAAAGGGTATCAAACAAATGCCCCACACTTTAAG ACGATCGTTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAGAGTCAAGTCTTTAGCGAAGAATTTATTCAAGCCT ATCAGTCTCTTAAATTCAACGCTGAAGTGTTCCCATGGGAGAGCAAACCTCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MVVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMFKEGIPFDASSFKGWQDIEHSDMILTPD LVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALQHLRDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDKSFENGVNFGHRPGRQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSELALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFSAILMAGMDGVKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKESQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPSNT_02630 | YP_005786670.1 | glutamine synthetase | VFG1399 | Protein | 2e-89 | 45 |
