|
Name : HPSNT_05890 (HPSNT_05890) Accession : YP_005787290.1 Strain : Helicobacter pylori Santal49 Genome accession: NC_017376 Putative virulence/resistance : Unknown Product : pyrimidine nucleoside transport protein (nupC) Function : - COG functional category : - COG ID : - EC number : - Position : 1206263 - 1207519 bp Length : 1257 bp Strand : - Note : COG1972 Nucleoside permease DNA sequence : ATGATTTTTAGCTCTCTTTTTAGTGTTGTAGGGATGGCGGTGCTTTTTCTTATTGCTTGGGTGTTTTCTGGCAATAAAAG GGCTATTAATTATCGCACGATTATTAGCGCGTTTGTGATCCAGGTGGCTTTAGGGGCGTTGGCTTTATATGTGCCTTTGG GTAGGGAAATGTTGCAAGGTTTGGCCAGCGGCATACAAAGCGTGATTGGCTACGGCTATGAGGGGGTGCGTTTTTTATTT GGCAATCTCGCTCCAAACGCTAAGGGCGATCAAGGGATAGGAGGCTTTATCTTTGCGATCAATGTTTTAGCGATCATTAT CTTTTTTGCTAGCTTGATTTCACTTCTATACTATTTAAAAATCATGCCTTTAGTCATTAACCTCATCGGTGGGGCGTTGC AAAAATGCTTAGGCACTTCTAAAGCAGAAAGCATGAGTGCAGCGGCTAATATTTTTGTAGCGCACACAGAAGCGCCATTA GTCATTAAACCTTATTTGAAAAGCATGAGCGATTCAGAGATCTTTGCGGTCATGTGCGTGGGCATGGCTAGCGTTGCAGG GCCTGTGTTAGCCGGGTATGCGAGCATGGGCATTCCTTTACCTTATTTAATAGCCGCATCGTTTATGTCCGCTCCTGGGG GTTTGTTGTTCGCTAAAATCATTTATCCGCAAAACGAAACCATTTCTAGCCATGCGGATGTTTCTGCAGAAAAGCATGTC AATGCCATAGAAGCTATCGCTAATGGGGCAAGCACAGGGCTAAATTTAGCCTTGCATGTGGGAGCGATGCTTTTAGCCTT TGTGGGGATGCTCGCGCTCATTAACGGGCTTTTAGGGGTTGTAGGGGGGTTTTTAGGCATGGAGCATTTGTCTTTAGGGT TGATTTTAGGCACGCTCTTAAAACCCTTAGCCTTTATGCTAGGCATTCCGTGGAGTCAGGCTGGGATTGCCGGAGAAATC ATAGGCATTAAAATCGCGCTCAATGAATTTGTGGGCTATATGCAATTTTTGCCTTATTTGGGCGATAACCCTCCTTTAAT CTTGAGCGAGAAAACTAAAGCGATCATCACTTTTGCGTTGTGCGGGTTCGCTAACTTAAGCTCAGTCGCTATGCTCATTG GAGGGCTTGGCAGTTTAGTGCCTAAAAAGAAGGATCTCATTATAAGGCTTGCTTTAAAAGCGGTGCTTGTAGGCACGCTT TCTAATTTCATGAGCGCGACTATCGCTGGGTTATTCATAGGACTAAACGCTCATTAA Protein sequence : MIFSSLFSVVGMAVLFLIAWVFSGNKRAINYRTIISAFVIQVALGALALYVPLGREMLQGLASGIQSVIGYGYEGVRFLF GNLAPNAKGDQGIGGFIFAINVLAIIIFFASLISLLYYLKIMPLVINLIGGALQKCLGTSKAESMSAAANIFVAHTEAPL VIKPYLKSMSDSEIFAVMCVGMASVAGPVLAGYASMGIPLPYLIAASFMSAPGGLLFAKIIYPQNETISSHADVSAEKHV NAIEAIANGASTGLNLALHVGAMLLAFVGMLALINGLLGVVGGFLGMEHLSLGLILGTLLKPLAFMLGIPWSQAGIAGEI IGIKIALNEFVGYMQFLPYLGDNPPLILSEKTKAIITFALCGFANLSSVAMLIGGLGSLVPKKKDLIIRLALKAVLVGTL SNFMSATIAGLFIGLNAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yutK | YP_005163383.1 | putative sodium/nucleoside cotransporter | Not tested | Not named | Protein | 2e-49 | 41 |
