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Name : glnA (HMPREF0462_0909) Accession : YP_005785476.1 Strain : Helicobacter pylori 83 Genome accession: NC_017375 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : - COG ID : - EC number : 6.3.1.2 Position : 898832 - 900277 bp Length : 1446 bp Strand : + Note : COG: COG0174; Pfam: PF03951,PF00120; InterPro: IPR004809 DNA sequence : ATGGTAGTAAGAACTCAAAATAGTGAAAGCAAGATCAAAGAATTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCACATCGCTTATTCTTTTGGGGCTTTAACGCATGGCATGTTTA AAGAGGGGATTCCTTTTGATGCGAGTTCTTTTAAAGGTTGGCAAGGCATTGAACACTCCGATATGATTTTAACCCCCGAT TTGGTGCGTTATTTCATTGACCCTTTTAGCGCGGATGTGAGCGTGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAAAAATGCCCTAGAAGTATCGCTAAAAAAGCCTTACAACATTTAAAAGATTCAGGTTTGGGCGATGTGG CTTATTTTGGCGCGGAGAATGAATTTTTCATCTTCGATTCTATTAAAATTAAAGACGCTTCCAATTCCCAATACTACGAA GTGGATAGCGAAGAGGGCGAATGGAATAGAGATAGAAGTTTTGAAAATGGCGTGAATTTTGGGCATAGACCGGGCAAGCA AGGGGGCTATATGCCCGTGCCTCCAACGGATACGATGATGGATATTCGCACTGAAATTGTGAAAGTCTTAAACCAAGTGG GGTTAGAAACTTTTGTCGTCCATCATGAAGTCGCGCAAGCACAAGGCGAAGTGGGCGTGAAATTTGGGGATTTAGTGGAA GCCGCTGACAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGCAAAACCGCCACTTTCATGCC AAAACCTTTATATGGGGATAACGGGAGCGGGATGCACACCCATGTGAGTGTTTGGAAAAACAACGAAAACCTTTTTAGCG GCGAAACTTACAAGGGCTTGAGCGAGTTGGCGTTGCATTTTTTAGGGGGCGTGTTGCGCCACGCTAGAGGGTTAGCCGCT TTCACTAACGCTTCCACTAATTCTTATAAACGCCTAATTCCTGGCTATGAAGCCCCATCTATTTTAACCTATTCGGCTAA TAATAGGAGTGCGAGCGTGCGTATCCCTTATGGGATTTCTAAAAACAGCGCAAGGTTTGAATTCAGGTTTCCTGACAGCT CATCAAACCCCTACTTGGCTTTTGCAGCGATTTTAATGGCGGGTATGGATGGCGTTAAAAACAAGATCGATCCCGGCGAA GCGATGGATATTAACCTTTTCAAATTGACTTTAGATGAAATCAGAGAAAAGGGTATCAAGCAAATGCCCCACACTTTAAG GAGATCGTTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAGAGTCAGGTCTTTAGCGAAGAATTTATTCAAGCCT ATCAGTCTCTTAAATTCAACGCTGAAGTGTTCCCATGGGAGAGCAAACCCCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MVVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMFKEGIPFDASSFKGWQGIEHSDMILTPD LVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDRSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSELALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFAAILMAGMDGVKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKESQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_005785476.1 | glutamine synthetase | VFG1399 | Protein | 3e-89 | 45 |
