Gene Information

Name : rplI (HMPREF0462_0907)
Accession : YP_005785474.1
Strain : Helicobacter pylori 83
Genome accession: NC_017375
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L9
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 896108 - 896557 bp
Length : 450 bp
Strand : -
Note : COG: COG0359; Pfam: PF01281,PF03948; InterPro: IPR000244

DNA sequence :
ATGAAGGTTCTATTACTAGAAGATGTGAAAAATTTGGGCAAAGCGGGTGAAGTGTGTGAGGTTAAAGATGGCTATGGGAA
TAACTTTTTAATCGCTAACAAAAAAGCCAAACTCGCCACTAACGAAGTGATCAACAAATACAAAGCCGAAGTTAAAAAGA
AAGCTGAAAAAGAAGCCCTAGAAAAGGCACAAAAATTGCAAATGGTAGAAACCTTACAAACCATCACGCTGACCATCCAT
AAAAAAGTCGGCGCGAATGGCTCTTTATTTGGAGCGATCACTAAAGAAGAGATCACAGAGCGTTTGAAAGAACAGCATGC
GAGTTTGGATTTGGATAAAAAAGACATTGAACTCAAACACCCGATTAAAAGCACAGGGATTTATGAGATTGAAGTCAAGC
TTGGATTTGGGGTTGTGGGCGCGTTTAAAATTGATGTGGTGGCTGAGTAG

Protein sequence :
MKVLLLEDVKNLGKAGEVCEVKDGYGNNFLIANKKAKLATNEVINKYKAEVKKKAEKEALEKAQKLQMVETLQTITLTIH
KKVGANGSLFGAITKEEITERLKEQHASLDLDKKDIELKHPIKSTGIYEIEVKLGFGVVGAFKIDVVAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplI YP_003728751.1 50S ribosomal protein L9 Not tested cag PAI Protein 1e-49 98