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Name : HMPREF0462_0902 (HMPREF0462_0902) Accession : YP_005785469.1 Strain : Helicobacter pylori 83 Genome accession: NC_017375 Putative virulence/resistance : Unknown Product : Sel1 repeat superfamily protein Function : - COG functional category : - COG ID : - EC number : - Position : 891400 - 892293 bp Length : 894 bp Strand : + Note : Pfam: PF08238; InterPro: IPR011990 DNA sequence : ATGGCTCAAATTGTAAAAGGATCCGACATGTTTAAAGATTTTTATCGCACCACTTTTTCTTTTTTAAAGCCTTTATTGTT TTTATTAGGTTTATTATTGCCGTTTTCACTTTGTATAGCTGATGGATATATTAGCATAAATCCTACTTGGGATGAATACA CGCAAAAATATAAGACATATTATTTTGAAAATGGTTTAGACAATTTTAATAAAGGCCAATACAAGCAAGCCTTTAAAGAT TTTAGAAAGGCGCAAGAATACGGCATTGGGCTTGGCAGTGTTTATTTAGCCAAAATGTATTTAGAGGGAAAGGGCGTGAA AGTGGATTACAAAAAAGCGCAACTCTATGCAAAAAACGCTATCAAAGGGTATGGGAGCGGCATGTTAGGGGGCGCTCTTA TTTTAGGATACATGCAAACAGAAGGCTTAGGGATGAAAAAGGATTTGAAACAGGTGCTCAATACTTACAGGCATGTGGTT CGCATACTTTCTAATAAAGGCATAAATTTTCATAACAATTTTAGATTACCAAACCTTGCACAAACGATTGGTATCGCTAT TGGATTGCGTTTCATTGATCTTTCAGGTTTGAGCGCAAATCCTAAAAAATTTGGAAAGAAATTTGAAAAACTTGAGGATT TTAATACATACATTCACGCCAACAGTGAGGTTCCTAATGCACCTTCTTTGGAAGATATTGCTGAAATTTCAAGCAATATT ATTTTACTCAAACAACAAATGGGGGAAATCCTTTATAGAATTGGTATCGCTTATAAAGAAGGGCTTGGCACCAGAAAACA AAAAAGTAGGGCTAAAAAATTCTTGCAAAAATCCACAGAATTTGGCTATGAAAAAGCAAGCTCTATAGTTTGTAATCAAA CTACCAAGCTTTAA Protein sequence : MAQIVKGSDMFKDFYRTTFSFLKPLLFLLGLLLPFSLCIADGYISINPTWDEYTQKYKTYYFENGLDNFNKGQYKQAFKD FRKAQEYGIGLGSVYLAKMYLEGKGVKVDYKKAQLYAKNAIKGYGSGMLGGALILGYMQTEGLGMKKDLKQVLNTYRHVV RILSNKGINFHNNFRLPNLAQTIGIAIGLRFIDLSGLSANPKKFGKKFEKLEDFNTYIHANSEVPNAPSLEDIAEISSNI ILLKQQMGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSTEFGYEKASSIVCNQTTKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPB8_726 | YP_003728747.1 | chitin synthase regulatory factor 3 | Not tested | cag PAI | Protein | 2e-71 | 73 |
