Name : HMPREF0462_0898 (HMPREF0462_0898) Accession : YP_005785465.1 Strain : Helicobacter pylori 83 Genome accession: NC_017375 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein Function : - COG functional category : - COG ID : - EC number : - Position : 888749 - 889258 bp Length : 510 bp Strand : - Note : - DNA sequence : TTGTTTGAAAAATGGATTGGTCTCTTTTTACTTCTTAATTCCTTAGCCTATCCATGCCAAAAAGTAACCATTAGTTTCAA ACAGTATGAGAATCTTACCCATATTCACCAAAAAGGTTGCGACAATGAAGTGGTGTGCAGAACGCTCATCTCTATCGCTT TATTGGAAAGTTCTTTAGGGTTGAACAACAAGCGCGAAATTTCCCTAAAAGACACTTCCTATTCCATGTTTCACATCACT TTGAACACCGCTAAAAAATTCTATCCTACCTATTCTAAAACGCTCCTCAAATACAAATTGCTCAATGATGTGGATTTTGC GATTTCATTGGCTAAAAGAATTTTGAAAGAAAATTTTGATTATTACAAACAAAAACACCCTAATAAAAGCGTGTATCAAA TAGTAGAAATGGCAGTAGGTGCTTACAATGGGGGAATGAAACACAACCCTAATGGCGCTTATGTGAAAAAGTTCCGCTGT GTCTATTCTCAGGTGCGCTACAACGAGTAG Protein sequence : MFEKWIGLFLLLNSLAYPCQKVTISFKQYENLTHIHQKGCDNEVVCRTLISIALLESSLGLNNKREISLKDTSYSMFHIT LNTAKKFYPTYSKTLLKYKLLNDVDFAISLAKRILKENFDYYKQKHPNKSVYQIVEMAVGAYNGGMKHNPNGAYVKKFRC VYSQVRYNE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
cag4 | YP_005777267.1 | cag island protein | Virulence | cag PAI | Protein | 2e-67 | 99 |
HP0523 | BAD13884.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 9e-68 | 99 |
HP0523 | BAD13802.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-68 | 99 |
HP0523 | BAD13939.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-67 | 98 |
HP0523 | BAD14048.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-67 | 98 |
cag4 | YP_005774546.1 | cag island protein | Virulence | cag PAI | Protein | 1e-67 | 98 |
HP0523 | BAD13775.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-68 | 98 |
cag4 | YP_005779067.1 | cag island protein | Virulence | cag PAI | Protein | 9e-68 | 98 |
HP0523 | BAD13829.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-66 | 96 |
HP0523 | BAD13856.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-66 | 96 |
cag4 | YP_005775726.1 | cag island protein | Virulence | cag PAI | Protein | 2e-66 | 96 |
HP0523 | BAD13994.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-66 | 95 |
HP0523 | BAD13966.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 7e-46 | 95 |
cag4 | AAR03855.1 | Cag4 | Virulence | cag PAI | Protein | 9e-65 | 94 |
HP0523 | BAD13911.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-65 | 94 |
cag4 | AAR03886.1 | Cag4 | Virulence | cag PAI | Protein | 2e-60 | 93 |
cag4 | AAR03915.1 | Cag4 | Virulence | cag PAI | Protein | 6e-63 | 93 |
HP0523 | NP_207319.1 | cag pathogenicity island protein (cag4) | Virulence | cag PAI | Protein | 3e-64 | 93 |
cag4 | AAR03946.1 | Cag4 | Virulence | cag PAI | Protein | 2e-64 | 93 |
cag4 | YP_003728743.1 | cag pathogenicity island protein gamma | Virulence | cag PAI | Protein | 3e-63 | 92 |
cag-gamma | AAF80194.1 | Cag-gamma | Virulence | cag PAI | Protein | 6e-63 | 92 |
cag4 | AGC69794.1 | cag pathogenicity island protein 4 | Virulence | cag PAI | Protein | 2e-63 | 92 |
HP0523 | BAD14022.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-63 | 92 |
orf9 | NP_223190.1 | cag island protein | Virulence | cag PAI | Protein | 4e-59 | 91 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
HMPREF0462_0898 | YP_005785465.1 | cag pathogenicity island protein | VFG0283 | Protein | 7e-65 | 93 |