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Name : HMPREF0462_0878 (HMPREF0462_0878) Accession : YP_005785445.1 Strain : Helicobacter pylori 83 Genome accession: NC_017375 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein Function : - COG functional category : - COG ID : - EC number : - Position : 866797 - 867510 bp Length : 714 bp Strand : + Note : - DNA sequence : ATGAAAACACTCGTGAAAAATATCATATCTTCTTTTTTGCTATTGTCTGTTTTGATGGCAGAAGATATAACAAGCGGTTT AAAGCAACTTGATAGCACCTACAAAGAGACCAACCAACAAGTGCTCAAAAACTTAGATGAGATTTTTTCAACCACTAGCC CTAGCGCTAATGATAAAATAGGTAAAGAAGATTCTCTAAACATCAAAAAAGCGGCCATTGCTTTGAGGGGAGATTTAGCG TTATTGAAAGCCAATTTTGAAGCGAATGAGTTATTTTTCATCTCAGAAGATGTGATTTTCAAGACTTATATGTCTAGCCC TGAACTTTTATTAACCTATATGAAAATCAATCCCTTAGACCAAAAGACTGCTGAGCAGCAATGCGGAATATCCGATAAAG TTTTAGTTCTTTATTGTGAGGGGAAGCTGAAAATCGAGCAAGAAAAACAAAATATAAGAGAGCGTTTAGAAACTTCTCTA AAGGCGTATCAGAGCAACATTGGAGGTACAGCTTCTTTAATCACTGCTTCACAGACGCTTGTAGAAAGCCTAAAGAATAA AAATTTCATTAAAGGAATCAGAAAGCTCATGTTAGCTCATGACAAGGTCTTTTTAAATTATTTAGAGAAGTTGGACGCAT TAGAAATATCCCTAGAACAAAGCAAGCGACAATACCTACAAGAAAGGCAATCAAGTAAGATTATTGTTAAATAA Protein sequence : MKTLVKNIISSFLLLSVLMAEDITSGLKQLDSTYKETNQQVLKNLDEIFSTTSPSANDKIGKEDSLNIKKAAIALRGDLA LLKANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQKTAEQQCGISDKVLVLYCEGKLKIEQEKQNIRERLETSL KAYQSNIGGTASLITASQTLVESLKNKNFIKGIRKLMLAHDKVFLNYLEKLDALEISLEQSKRQYLQERQSSKIIVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HP0539 | BAD13845.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-103 | 99 |
| HP0539 | BAD14010.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 7e-104 | 99 |
| cagL | YP_005774532.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-104 | 99 |
| HP0539 | BAD13955.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-104 | 99 |
| cagL | YP_005777280.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-104 | 99 |
| HP0539 | BAD13818.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-104 | 99 |
| HP0539 | BAD14064.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 5e-101 | 98 |
| HP0539 | BAD13900.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-103 | 98 |
| HP0539 | BAD13791.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-103 | 98 |
| cagL | YP_005779054.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-103 | 98 |
| cagL | AGC69801.1 | cag pathogenicity island protein L | Virulence | cag PAI | Protein | 5e-102 | 97 |
| HP0539 | BAD13872.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-102 | 97 |
| cagL | YP_003728725.1 | cag pathogenicity island protein L | Virulence | cag PAI | Protein | 8e-102 | 97 |
| cagL | YP_005775739.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-102 | 97 |
| HP0539 | BAD14037.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-101 | 97 |
| HP0539 | BAD13982.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-101 | 97 |
| cagL | NP_223205.1 | cag island protein | Virulence | cag PAI | Protein | 4e-100 | 96 |
| cagL | AAC44697.1 | CagL | Virulence | cag PAI | Protein | 3e-100 | 96 |
| HP0539 | NP_207335.1 | cag pathogenicity island protein (cag18) | Virulence | cag PAI | Protein | 3e-100 | 96 |
| cag18 | AAR03962.1 | Cag18 | Virulence | cag PAI | Protein | 1e-100 | 96 |
| cag18 | AAR03931.1 | Cag18 | Virulence | cag PAI | Protein | 1e-100 | 96 |
| cag18 | AAR03901.1 | Cag18 | Virulence | cag PAI | Protein | 1e-99 | 95 |
| cag18 | AAR03873.1 | Cag18 | Virulence | cag PAI | Protein | 2e-100 | 95 |
| HP0539 | BAD13927.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-99 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HMPREF0462_0878 | YP_005785445.1 | cag pathogenicity island protein | VFG0298 | Protein | 1e-100 | 96 |
