Gene Information

Name : tnpB3 (HMPREF0462_0868)
Accession : YP_005785435.1
Strain : Helicobacter pylori 83
Genome accession: NC_017375
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 854782 - 855033 bp
Length : 252 bp
Strand : +
Note : Pfam: PF07282; InterPro: IPR010095

DNA sequence :
TTGCTAGATTTGCTAGACTACAAACAACAGCATAATGGCAAATTGTTAGTGAAAGTTCCCCCACAATACACCAGCAAAAC
TTGCTGTAATTGTGGGAGCATCAACCCCAAGCTCAAATTGAATCACAAGCAATATTTGTGTCCTGATTGTGGGTATAAAG
AACACAGAGATATTAACGCTACGAACAATATTTTAAGTAAAGGGTTAAGTCTTTTTGGGGTAGGAAATGTCCTTGCAGAC
TTTAAAGAATAA

Protein sequence :
MLDLLDYKQQHNGKLLVKVPPQYTSKTCCNCGSINPKLKLNHKQYLCPDCGYKEHRDINATNNILSKGLSLFGVGNVLAD
FKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB YP_005779045.1 IS606 transposase Not tested cag PAI Protein 5e-29 84
tnpB YP_005777289.1 IS606 transposase Not tested cag PAI Protein 8e-27 84
tnpB YP_005774523.1 IS606 transposase Not tested cag PAI Protein 6e-23 81