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Name : xerD2 (HMPREF0462_1514) Accession : YP_005786080.1 Strain : Helicobacter pylori 83 Genome accession: NC_017375 Putative virulence/resistance : Unknown Product : integrase/recombinase Function : - COG functional category : - COG ID : - EC number : - Position : 1520887 - 1521963 bp Length : 1077 bp Strand : - Note : COG: COG0582; Pfam: PF00589; InterPro: IPR013762 DNA sequence : ATGAAAAAATCAAATGACAATAACGCACTCTCCAGAAGTCAAAGGGAGTTGTTTGTAGGGATTAGAGATTTTATTGTTTT TAAATTTAAGCGTATGGTTGTTTTTAACGGAGTAAGGGATTTTACAAAAATGAGATTTTTGTCCATAGAATTAGAAAAAT GCGAAAATATTAAAGATTTGGAAAAATTATGTCATACAATTTATAATCAAGGCACAAAGCATATTTTGATGATGCGTGTA TTATTTTTATTCTTTGACTATTTTTGCAAGCATTTGAAAGTTAAGCGATTGAGACTGCTCAATGAAGAAATGCTTGTGAA TTTTTTATTTGAGTTAGCTAAACAAAGAAAGATTAATTCAATGGCAAAATATGTAATGTATATTAGGCAATTTTTTGATT ACTTGGATAGGACTAAACATTATGAATTTTATTTTAGTCTTAAAAATATAGCCTTTGCTAAACACAAGGATAATTTGCCT AAACATCTAAATTCAAAAGATTTAAAATCTTTTATATATACTCTTATAAACTATAAAACTAGAAGCAGTTATGAAAAGAG AAATAAGTGTATTTTGCTCTTAATTATTTTGGGTGGTTTGAGAAAATCTGAGGTTTTTAATTTAGAATTGAGAAATATTG TTTTAGAAAAAGAGCATTATATCTTGCTTATAAAAGGCAAAAACAATAAAGAGCGAAAAGCGTTCATTAAACGAGAAATG CTAGAAAAATCTTTAGATGAGTGGTTGGGTGATAGCAAACGATTGAGTAGTTTTAATGGGCGTTTTGTATTTAAGAAGTC TTTGTCTAACTATACTCAAAAGCATTGTTCAATCAGTAATTTTGTGTTAAAGATTTTTATGTTGAGTGGTATTGAAAATT TTAAACAATATGGCACAGGATTGCACCTATTTAGGCATAGTTTTGCCACTTTAGTCTATGCTAAGAGTAGGGATATTGTT TTGACTTCAAGAGCATTGGGGCATCAGTCCTTAAGCTCCACAAAAATCTACATTCACACCGCACAAGAATATAATAAACA AGTAGCAATCATTTTTGATAATTTGTTGAGTGGGTGA Protein sequence : MKKSNDNNALSRSQRELFVGIRDFIVFKFKRMVVFNGVRDFTKMRFLSIELEKCENIKDLEKLCHTIYNQGTKHILMMRV LFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYIRQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLP KHLNSKDLKSFIYTLINYKTRSSYEKRNKCILLLIILGGLRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREM LEKSLDEWLGDSKRLSSFNGRFVFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSFATLVYAKSRDIV LTSRALGHQSLSSTKIYIHTAQEYNKQVAIIFDNLLSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 8e-89 | 57 |
