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Name : rplS (HMPREF0462_1156) Accession : YP_005785722.1 Strain : Helicobacter pylori 83 Genome accession: NC_017375 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : - COG ID : - EC number : - Position : 1163906 - 1164262 bp Length : 357 bp Strand : - Note : COG: COG0335; Pfam: PF01245; InterPro: IPR001857 DNA sequence : ATGAAAAACCGCTACATTCAGCAGTTTGAAGACGCTCAATTAAAAGACAAGACCATGCCAGCGTTTAAAGCCGGCGATAC TTTGAGGCTTGGTATCACCATTAAAGAAGGCGAAAAAACACGAACTCAGTATTTTGAGGGCGTGTGCATTGCGATTAGAG GCAATGGCGTGGATAAGACTTTTTGCGTGCGTAAAATAGGGGCTAACAATATCGGCGTGGAGAAAATTTTCCCTTTCTAT AGCGAAAGTTTGGCGAGCGTTGAGGTGTTGCGTGTGGGTAGGGTGCGCCGTGCGAAGCTCTACTATTTGCGCGATAGGAG AGGTAAGGCAGCAAGGATTAAAGAAATCCGCCATTAA Protein sequence : MKNRYIQQFEDAQLKDKTMPAFKAGDTLRLGITIKEGEKTRTQYFEGVCIAIRGNGVDKTFCVRKIGANNIGVEKIFPFY SESLASVEVLRVGRVRRAKLYYLRDRRGKAARIKEIRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 3e-24 | 53 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 3e-21 | 50 |
