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Name : trbI (HMPREF0462_0102) Accession : YP_005784669.1 Strain : Helicobacter pylori 83 Genome accession: NC_017375 Putative virulence/resistance : Virulence Product : conjugal transfer protein TrbI Function : - COG functional category : - COG ID : - EC number : - Position : 97999 - 99201 bp Length : 1203 bp Strand : - Note : COG: COG2948; Pfam: PF03743; InterPro: IPR005498 DNA sequence : ATGAAACAATCCTTACTTAAAAAAATCGGCTTAGTTATAGGGGGCTTTGGTGCTTTAATGGCATTAGGATTGCTTGCTAA TAAAGGTTCAAACAATAACAATAAAGAAGAAATCTTTCAAGTAAATGAGAGTAAATTCCCACTAAGTGATTATTTCTTTG AAGAAGTCAAAGAAGAACCAAAAAAAGAAGAAAGCCCCAAAACAATAACTACGCCACAACCTACAGCTCCAACTACTACT AATGTTTCAACTAATCCTATCATTACAGATTATAGTCATCTTAACAGCAATCTCAACAAGCAAAATGACACCATCACGCA TTTGCAACAAGTCTTACAAAGCCCCCCTAAAATGAAACCTAAATTAAAGCATACTAAAGAGCAATTAGAGTTTTTAAACA CACGCCTTAAACCTTTAGAACCAACTAAACCAGCCACTAAGCCTGAGACGGAATATGGCGTGGATAGTTTTAGCAATTTA AGATATAAAGACATCGGCACTAATGAGCATAAGCTCTTAAGAACTATAACCGCTGATAGAATGATACCAGCCTTTTTAAT CACGCCTATTAGTTCTCAAATCGCTGGAAAAGTAACCGCTCAAGTAGAGAGTGATATTTTTGCTTCTATGGGTAGAGCGG TGCTAATTCCTAAAGGCTCTAAGGTTATAGGCTATTACAATAACAATAATCAAATTGGGCAATACCGCTTAAACATTGCT TGGACTAGAATTATCACCCCTCAAGGCATAAATATCATGCTCACTAATGCAAGGGGGGCTGATGTGAAAGGCTATAATGG CTTAGTAGGCAAATATATTAGCCGAAATTTTCAACGCTATGGTATCCCCTTACTCACTAACACGCTTTCTAATGGGCTTT TAATAGGAATTACTTCAGCCTTAGCTAATCAACAAAATAAAAAAGGTGATGGCAACCCTTTTTTTGGGGATTACTTGCTT ATGCAACTCACTAGAAACACAGGTATGGGGATTAACCAAATTATCAATCAAATGCTAAGACAATATGGAGCGCAAAACCC CATTATCATCATTAGAGAGGGGAGCAGAGTGTTTATTAGTCCTAATTTAGACATCTTTATCCCTAAACCAAAAGATGGGG AGGTCCTAGCGGAGTTTTTTAAAGAGAAAAAACCGCTAATCAAAAAATCAAACGAGGAAGTTAATAATGAAGAAGAAATC TAA Protein sequence : MKQSLLKKIGLVIGGFGALMALGLLANKGSNNNNKEEIFQVNESKFPLSDYFFEEVKEEPKKEESPKTITTPQPTAPTTT NVSTNPIITDYSHLNSNLNKQNDTITHLQQVLQSPPKMKPKLKHTKEQLEFLNTRLKPLEPTKPATKPETEYGVDSFSNL RYKDIGTNEHKLLRTITADRMIPAFLITPISSQIAGKVTAQVESDIFASMGRAVLIPKGSKVIGYYNNNNQIGQYRLNIA WTRIITPQGINIMLTNARGADVKGYNGLVGKYISRNFQRYGIPLLTNTLSNGLLIGITSALANQQNKKGDGNPFFGDYLL MQLTRNTGMGINQIINQMLRQYGAQNPIIIIREGSRVFISPNLDIFIPKPKDGEVLAEFFKEKKPLIKKSNEEVNNEEEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB10-1 | YP_002301098.1 | VirB10 type IV secretion protein | Virulence | cag PAI | Protein | 5e-64 | 52 |
