Gene Information

Name : tnpA (HMPREF0462_0096)
Accession : YP_005784663.1
Strain : Helicobacter pylori 83
Genome accession: NC_017375
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 93294 - 93740 bp
Length : 447 bp
Strand : -
Note : COG: COG1943; Pfam: PF01797; InterPro: IPR002686

DNA sequence :
ATGAATAAGGATAGAGGAATGAGAAAAAACCATTATCCATTAAGGGGGTATATCTCAACCAACAGAAGTAAGCACAATCT
AAAAGCCCATTTGATTTTAGTGTGCAAATACAGAAAAAAGTTATTGCAAGGGGATTTGAATCATTTTATGAAGTCTGTTG
TAGATGAGATAGCCACCCAAAGTGATTTCATTATCATTGCGATGGAAAGCGATATAGATCATTTGCACTTAATGGTTCAA
TATATTCCTAGAATGTCTATTAGTTCCATTATTTCTAGAATCAAACAAATCACTACTTATAGAGTTTGGCGCAATAAAAT
ATTTATCCCCTTATTGCAAAAACACTTTTGGAAAGAAAAAACTTTTTGGACTGATGGATTTTTTGCTTGCTCTATCGGTG
AGGCTAACCCTGAAACGATCAAGTCGTATATAGAAAATCAAGGTTAG

Protein sequence :
MNKDRGMRKNHYPLRGYISTNRSKHNLKAHLILVCKYRKKLLQGDLNHFMKSVVDEIATQSDFIIIAMESDIDHLHLMVQ
YIPRMSISSIISRIKQITTYRVWRNKIFIPLLQKHFWKEKTFWTDGFFACSIGEANPETIKSYIENQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAC44689.1 TnpA Not tested cag PAI Protein 7e-56 93
tnpA AAC44709.1 TnpA Not tested cag PAI Protein 7e-56 93