Gene Information

Name : cag18 (hp2017_0520)
Accession : YP_005783509.1
Strain : Helicobacter pylori 2017
Genome accession: NC_017374
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 519111 - 519770 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAGAAGATATAACAAGCGGCTTAAAGCAACTGGATAGCACCTACCAAGAGACCAACCAACAAGTGCTCAAAAACTT
AGATGAGATTTTTTCAACCACTAGCCCTAGCGCTAATGATAAAATGGGTGAAGAAGATGCTCTAAACATCAAAAAAGCGG
CCATGGCTTTGAGAGGAGATTTAGCGTTATTGAAAGCCAATTTTGAAGCGAATGAGTTATTTTTCATCTCAGAAGATGTG
ATTTTTAAGACTTATATGTCTAGCCCTGAACTTTTATTGACCTATATGAAAATCAATCCCTTAGACCAAAAGACTGCTGA
GCAGCAATGCGGAATATCCGATAAAATTTTAGTTCTTTATTGTGAAGGGAAGCTGAAAATCGAGCAAGAAAAACAAAATA
TAAGAGAGCGTTTAGAAACTTCTCTAAAGGCGTATCAGAGCAACATTGGAGGTACAGCTTCCTTAATCATTGCTTCACAG
ACGCTTGTAGAAAGCCTAAAGAATAAAAATTTCATCAAAGGAATCAGAAAGCTTATGTTAGCTCACAACAAGGTCTTTTT
AAATTATTTAGAGGAGTTGGACGCATTAGAAAGATCCCTAGAACAAAGCAAGCGACAATACCTACAAGAAAGGCAATCAA
GTAAGATCATTGTCAAATGA

Protein sequence : 
MAEDITSGLKQLDSTYQETNQQVLKNLDEIFSTTSPSANDKMGEEDALNIKKAAMALRGDLALLKANFEANELFFISEDV
IFKTYMSSPELLLTYMKINPLDQKTAEQQCGISDKILVLYCEGKLKIEQEKQNIRERLETSLKAYQSNIGGTASLIIASQ
TLVESLKNKNFIKGIRKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0539 BAD13927.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-95 98
HP0539 NP_207335.1 cag pathogenicity island protein (cag18) Virulence cag PAI Protein 1e-94 98
cag18 AAR03962.1 Cag18 Virulence cag PAI Protein 2e-95 98
cagL AGC69801.1 cag pathogenicity island protein L Virulence cag PAI Protein 1e-94 97
cagL NP_223205.1 cag island protein Virulence cag PAI Protein 4e-94 97
HP0539 BAD14037.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-95 97
cag18 AAR03931.1 Cag18 Virulence cag PAI Protein 4e-94 97
HP0539 BAD13982.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-94 97
HP0539 BAD14064.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-91 96
cag18 AAR03873.1 Cag18 Virulence cag PAI Protein 1e-94 96
cagL YP_005777280.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-92 96
HP0539 BAD13845.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-93 96
HP0539 BAD14010.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-93 96
cagL YP_003728725.1 cag pathogenicity island protein L Virulence cag PAI Protein 2e-94 96
HP0539 BAD13818.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-93 96
cagL AAC44697.1 CagL Virulence cag PAI Protein 8e-94 96
cagL YP_005774532.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-92 96
HP0539 BAD13955.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-93 95
cag18 AAR03901.1 Cag18 Virulence cag PAI Protein 7e-93 95
HP0539 BAD13900.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-92 95
cagL YP_005779054.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-92 95
HP0539 BAD13791.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-92 95
HP0539 BAD13872.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-92 94
cagL YP_005775739.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-92 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cag18 YP_005783509.1 cag pathogenicity island protein VFG0298 Protein 4e-95 98