Gene Information

Name : hp2017_0510 (hp2017_0510)
Accession : YP_005783499.1
Strain : Helicobacter pylori 2017
Genome accession: NC_017374
Putative virulence/resistance : Virulence
Product : cag island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 508091 - 509539 bp
Length : 1449 bp
Strand : -
Note : -

DNA sequence :
GTGGTGAATAAGAAGATTGCTTATTTGGGAGATGAAAAACCCATCACGATTTGGACTTCATTAGACAATGTTACTGTGAT
CCAACTTGAAAAAGATGAAACTATTTCTTACATCACAACAGGTTTCAATAAAGGTTGGAATATTGTGCCTAATTCTAATC
ACATATTCATTCAACCTAAATCGGTAAAAAGTAATCTCATGTTTGAAAAAGAAGCAGTGAATTTTGCCCTAATGACAAGA
GATTACCAAGAATTTTTAAAAACAAAAAAACTTATCGTAGATGCGCCTGACCCTAAAGAATTAGAAGAACAAAAAAAAGC
TCTAGAAAAAGAAAAAGAAGCTAAAGAACAAGCGCAAAAAGCGCAAAAAGATAAAAGAGAAAAAAGAAAGGAGGAGCGTG
CAAAAAATAGAGCCAATTTAGAAAATCTCACTAACGCTATGAGTAACCCACAAAATTTGAGCAATAACAAAAATCTTAGC
GAATTGATCAAGCAACAGAGAGAAAATGAATTAGACCAAATGGAACGACTAGAGGACATGCAAGAGCAGGCTCAAGCTAA
CGCGCTCAAACAAATTGAAGAGCTCAACAAGAAACAAGCTGAAGAGGCAGTTAGGCAAAGAGCCAAGGATAAAATCAGTA
TTAAGACAGATAAATCTCAAAAAAGCCCCGAGGATAACTCCATAGAATTATCTCCTAGCGATAGCGCTTGGAGGACTAAT
CTTGTTGTGCGGACCAATAAAGCCTTGTATCAATTCATTTTGAGGATAGCTCAAAAAGACAATTTTGCTTCAGCGTATCT
AACAGTCAAATTAGAATACCCACAAAGACACGAAGTCTCTAGCGTTATTGAAGAGGAATTAAAAAAGAGAGAAGAAGCAA
AGAGGCAGAGAGAATTGATCAAGCAAGAAAATCTCAACACCACAGCCTACATCAATAGAGTAATGATGGCGAGCAATGAA
CAGATTATCAACAAAGAAAAAATAAGAGAAGAAAAACAAAAAATTATACTAGATCAAGCAAAGGCGCTAGAGACCCAATA
TGTGCATAATGCGTTAAAAAGAAACCCTGTGCCTAGAAACTACAATTACTACCAAGCGCCTGAAAAACGCTCTAAACATA
TTATGCCCTCTGAAATTTTTGATGATGGCACATTCACTTATTTTGGTTTCAAAAACATCACTCTCCAACCTGCTATTTTT
GTGGTTCAACCTGATGGGAAATTGAGCATGACTGATGCCGCCATTGATCCTAACATGACCAATTCAGGATTGAGATGGTA
TAGAGTTAATGAAATTGCAGAGAAGTTTAAGCTCATTAAAGACAAAGCCCTTGTAACAGTGATCAATAAAGGCTATGGGA
AAAATCCATTGACAAAAAATTACAATATCAAAAACTATGGTGAATTGGAGCGTGTGATTAAAAAGCTCCCTCTTGTTAGA
GATAAATAA

Protein sequence :
MVNKKIAYLGDEKPITIWTSLDNVTVIQLEKDETISYITTGFNKGWNIVPNSNHIFIQPKSVKSNLMFEKEAVNFALMTR
DYQEFLKTKKLIVDAPDPKELEEQKKALEKEKEAKEQAQKAQKDKREKRKEERAKNRANLENLTNAMSNPQNLSNNKNLS
ELIKQQRENELDQMERLEDMQEQAQANALKQIEELNKKQAEEAVRQRAKDKISIKTDKSQKSPEDNSIELSPSDSAWRTN
LVVRTNKALYQFILRIAQKDNFASAYLTVKLEYPQRHEVSSVIEEELKKREEAKRQRELIKQENLNTTAYINRVMMASNE
QIINKEKIREEKQKIILDQAKALETQYVHNALKRNPVPRNYNYYQAPEKRSKHIMPSEIFDDGTFTYFGFKNITLQPAIF
VVQPDGKLSMTDAAIDPNMTNSGLRWYRVNEIAEKFKLIKDKALVTVINKGYGKNPLTKNYNIKNYGELERVIKKLPLVR
DK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0528 BAD13780.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagX YP_005779062.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD13861.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD13834.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD13944.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagX YP_005774541.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD13807.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagX YP_005775731.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD13889.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD14053.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cag8 AAR03891.1 Cag8 Virulence cag PAI Protein 0.0 99
HP0528 BAD13971.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
orf15 NP_223195.1 cag island protein Virulence cag PAI Protein 0.0 99
HP0528 BAD14027.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cag8 AAR03863.1 Cag8 Virulence cag PAI Protein 0.0 99
cag8 AAR03921.1 Cag8 Virulence cag PAI Protein 0.0 99
cag8 AAR03952.1 Cag8 Virulence cag PAI Protein 0.0 99
cagX YP_003728736.1 cag pathogenicity island protein X Virulence cag PAI Protein 0.0 99
HP0528 NP_207324.1 cag pathogenicity island protein (cag8) Virulence cag PAI Protein 0.0 99
HP0528 BAD13999.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cag-X AAF80199.1 Cag-X Virulence cag PAI Protein 0.0 99
cagX AGC69795.1 cag pathogenicity island protein X Virulence cag PAI Protein 0.0 99
HP0528 BAD13916.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99
cagX YP_005777272.1 cag pathogenicity island protein Virulence cag PAI Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hp2017_0510 YP_005783499.1 cag island protein VFG0288 Protein 0.0 99