Gene Information

Name : hp2017_0508 (hp2017_0508)
Accession : YP_005783496.1
Strain : Helicobacter pylori 2017
Genome accession: NC_017374
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein Z
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 504281 - 504880 bp
Length : 600 bp
Strand : -
Note : -

DNA sequence : 
ATGGAACTAGGTTTCAATGAAACAGAAAGACAAAAGATCTTAGACAGCAACAGTTCTCTTATAAGAAATGCGAATGAAGT
AAGGGATAAGTTTATTCAAAATTACGCCATTTCTTTAAAAGATAGCAACGATCCACAAGATTTTTTGAGAAGGGTTCAAG
AGTTAAGAATCAATATGCAAAAGAATTTTATTAGTTTTGATACTTATTACAACTATTTAAACAACCTTGTGTTAGCCAGT
TACAATCGTTGCAAACAAGAAAAGACTTTTGCAGAAAGCACGATCAAAAATGAACTAACGCTTGGAGAGTTTGTTGCAGA
AATTTCTGACAACTTCAATAATTTCATGTGTGATGAAGTGGCAAGAATTTCAGACCTAGTGGCTTCTTATCTGCCAAGAG
AGTATTTACCGCCATTCATAGATGGCAATATGATGGGCGTGGCGTTTCAGATTCTAGGGATAGATGATTTTGGGAGAAAG
CTCAATGAAATTGTCCAAGATATAGGGACTAAATATATCATTTTGAGCAAAAATAAGACTTATCTCACTTCTTTAGAAAG
AGCTAAATTGATAACCCAGTTAAAATTAAATTTGGAATAA

Protein sequence : 
MELGFNETERQKILDSNSSLIRNANEVRDKFIQNYAISLKDSNDPQDFLRRVQELRINMQKNFISFDTYYNYLNNLVLAS
YNRCKQEKTFAESTIKNELTLGEFVAEISDNFNNFMCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQILGIDDFGRK
LNEIVQDIGTKYIILSKNKTYLTSLERAKLITQLKLNLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0526 BAD13887.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-87 99
orf12 NP_223193.1 cag island protein Virulence cag PAI Protein 2e-87 99
HP0526 BAD13914.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-87 99
cag6 AAR03949.1 Cag6 Virulence cag PAI Protein 3e-85 98
HP0526 NP_207322.1 cag pathogenicity island protein (cag6) Virulence cag PAI Protein 2e-85 98
cag6 AAR03918.1 Cag6 Virulence cag PAI Protein 3e-85 98
cag6 AAR03889.1 Cag6 Virulence cag PAI Protein 1e-84 97
HP0526 BAD13832.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-85 97
HP0526 BAD13942.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-84 97
HP0526 BAD13969.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-85 97
HP0526 BAD13859.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-85 97
cagZ YP_003728738.1 cag pathogenicity island protein Z Virulence cag PAI Protein 6e-85 97
HP0526 BAD13778.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-85 97
HP0526 BAD13997.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-85 97
cagZ YP_005775729.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-85 97
HP0526 BAD14051.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-85 97
HP0526 BAD14025.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-85 97
cagZ YP_005779064.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-85 97
cag-Z AAF80197.1 Cag-Z Virulence cag PAI Protein 7e-86 97
cag6 AAR03860.1 Cag6 Virulence cag PAI Protein 3e-85 97
cagZ YP_005777270.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-85 97
HP0526 BAD13805.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-85 96
cagZ YP_005774543.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-84 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hp2017_0508 YP_005783496.1 cag pathogenicity island protein Z VFG0286 Protein 7e-86 98