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Name : hp2017_0271 (hp2017_0271) Accession : YP_005783249.1 Strain : Helicobacter pylori 2017 Genome accession: NC_017374 Putative virulence/resistance : Unknown Product : ClpB protein Function : - COG functional category : - COG ID : - EC number : - Position : 262559 - 265129 bp Length : 2571 bp Strand : + Note : - DNA sequence : ATGAATTTATTTGAAAAAATGACTGACCAATTGCATGAGGCTTTAGACAGCGCGCTCGCTTTAGCTTTGCACTATAAGAA CGCTGAAGTAACGCCCATGCACATGCTTTTTGCCATGCTCAATAACTCCCAAGGCATTCTCCTTCAAGCCTTACAAAAAA TGCCTGTGGATATTGAAGCTTTAAAACTTAGCGTTCAAAGCGAGTTGAATAAGTTCGCTAAAGTTTCACAAATCAGCAAG CAAAACATCCAATTAAACCAAGCTTTAATCCAAAGTTTAGAAAACGCTCAAGGCTTGATGGCTAAAACGGGCGATTCTTT CATCGCTACCGATGCGTATCTTTTGGCGAATATGAATCTTTTTGAAAGCGTTCTAAAGCCTTATTTAGACACTAAGGAAT TGCAAAAAACTTTAGAATCTTTAAGAAAAGGCAGGACTATCCAGGATAAAAATGATGATTCCAATTTAGAAAGTTTAGAA AAATTTGGCATTGATTTGACGCAAAAAGCCTTAGAAAATAAGTTGGATCCCGTGATCGGGAGAGATGAAGAAATCATTCG CATGATGCAAATTTTGATCAGAAAAACAAAAAATAACCCTATTTTATTGGGTGAGCCTGGAGTGGGGAAAACGGCTGTTG TGGAAGGGCTAGCCCAACGCATTGTGAATAAGGAAGTGCCTAAAACGCTTTTAAACAAACGGGTTGTCGCTTTAGATTTA AGCTTATTGGTGGCTGGGGCGAAATACAGAGGCGAGTTTGAAGAGCGCCTGAAAAAGGTGATTGAAGAAGTTAAAAAAAG CGCGAATGTGATTTTATTCATTGATGAAATCCACACGATTGTGGGGGCTGGGGCTAGTGAGGGGGGCATGGATGCGGCCA ATATTTTAAAACCCGCGCTCGCTAGGGGGGAATTGCACACGATTGGAGCGACCACTTTAAAAGAATACCGCAAGTATTTT GAAAAAGACATGGCGCTACAAAGGCGTTTCCAACCCATTTTACTCAATGAGCCTAGCATCAATGAAGCTTTACAGATTTT AAGGGGGTTGAAAGAAACTTTAGAAACGCACCATAATATCACCATCAATGACTCCGCGCTCATAGCGAGCGCTAAGCTCT CTAGCCGTTATATCACCGATAGGTTTTTACCCGATAAAGCGATTGATTTGATTGATGAGGGGGCGGCTCAATTAAAAATG CAAATGGAATCAGAGCCGGCCAAACTCTCTAGCGTGAAGCGCTCCATTCAAAGACTAGAAATGGAAAAACAAGCCCTTGA AATGGAAAACAAAGAGAGCAACCACAAACGCATGCAAGAAATCCTTAAAGAATTGAGCGATTTGAAAGAGAAAAAAATCC AATTAGAAGCACAATTTGAAAACGAAAAAGAAGTGTTTAAAGAAATTTCACGCTTGAAAATGGAAATGGAGAGCTTGAAA AAAGAAGCCGAAAGGTTTAAACGCAATGGGGATTACCAGCAAGCGGCTGAAATTGAATACTCTAAAATCCCTGAAAAGGA AAAGAAAGAAAAAGAATTGCAGCATAAATGGGAAACGATGCAACAAAACGGGGCGTTGTTGCAAAACGCTTTAACCGAAA ACAACATCGCTGAGATCGTGAGCCAATGGACGCACATCCCGGTCCAAAAAATGCTCCAAAGCGAAAAAAATAGGGTTTTA AACATTGAAAGCGAATTGCAAAAAAGGGTGGTAGGGCAAGAAAAAGCGCTCAAAGCGATCGCTAAAGCGATTAAAAGGAA TAAGGCCGGGCTTAGCGATAGCAACAAGCCCATAGGGAGTTTCCTCTTTTTAGGGCCAACAGGCGTGGGTAAAACCGAGA GCGCTAAAGCCTTGGCACAATTCTTGTTTGATAGCGATAAAAATCTTATAAGGATTGACATGAGCGAATACATGGAAAAG CACGCTATCAGCCGTCTTATTGGGGCCGCTCCTGGGTATGTGGGCTATGAAGAAGGCGGGCAATTGACCGAAGCGGTGCG CAGAAAGCCTTATAGCGTGGTGCTGTTAGATGAAGTGGAAAAAGCCCATCCGGATGTGTTTAACCTTTTGTTGCAGGTTT TAGATGAGGGGCATTTAACCGATAGTAAGGGCGTGAGGGTGGATTTCAAAAACACGATTTTGATTTTAACCAGCAATGTG GCTAGCGGCGCGCTTTTAGAAGAGGATTTGAGTGAAGCCGATAAACAAAAAGCGATCAAAGAGAGCCTGAGGCAGTTCTT CAAGCCGGAATTTTTAAACCGCTTAGATGAAATCATCTCCTTTAACGCCCTAGATAGTCATGCTATCATCAATATCGTGG GGATACTCTTTGAAAACATTCAAAAAAAAGCGCTTGAAAGGGGCATTAATATAACCCTAGACGAAAAGGCAAAAGAATTG ATCGCCGAAGCAGGATTTGACAGATTCTATGGCGCTAGACCCCTAAAACGCGCGCTCTATGAAATGGTAGAAGACAAGCT CGCTGAACTCATTTTAGAAGATAAAATTAAAGAGAATGACAGCGTGGCGTTTGTGGTAGAAAATAACGAGATTGTGCCTA AGATTAAGTGA Protein sequence : MNLFEKMTDQLHEALDSALALALHYKNAEVTPMHMLFAMLNNSQGILLQALQKMPVDIEALKLSVQSELNKFAKVSQISK QNIQLNQALIQSLENAQGLMAKTGDSFIATDAYLLANMNLFESVLKPYLDTKELQKTLESLRKGRTIQDKNDDSNLESLE KFGIDLTQKALENKLDPVIGRDEEIIRMMQILIRKTKNNPILLGEPGVGKTAVVEGLAQRIVNKEVPKTLLNKRVVALDL SLLVAGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPALARGELHTIGATTLKEYRKYF EKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITINDSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKM QMESEPAKLSSVKRSIQRLEMEKQALEMENKESNHKRMQEILKELSDLKEKKIQLEAQFENEKEVFKEISRLKMEMESLK KEAERFKRNGDYQQAAEIEYSKIPEKEKKEKELQHKWETMQQNGALLQNALTENNIAEIVSQWTHIPVQKMLQSEKNRVL NIESELQKRVVGQEKALKAIAKAIKRNKAGLSDSNKPIGSFLFLGPTGVGKTESAKALAQFLFDSDKNLIRIDMSEYMEK HAISRLIGAAPGYVGYEEGGQLTEAVRRKPYSVVLLDEVEKAHPDVFNLLLQVLDEGHLTDSKGVRVDFKNTILILTSNV ASGALLEEDLSEADKQKAIKESLRQFFKPEFLNRLDEIISFNALDSHAIINIVGILFENIQKKALERGINITLDEKAKEL IAEAGFDRFYGARPLKRALYEMVEDKLAELILEDKIKENDSVAFVVENNEIVPKIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-139 | 46 |
