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Name : tnpB2a (hp2017_14801) Accession : YP_005784500.1 Strain : Helicobacter pylori 2017 Genome accession: NC_017374 Putative virulence/resistance : Unknown Product : IS606 Transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1489550 - 1490662 bp Length : 1113 bp Strand : + Note : - DNA sequence : ATGAAAGTCAATAAGGGTTTTAAATTCCGCTTGTATCCCACTAAAGAACAACAAGATAAATTGCAACACTGTTTTTTTGT CTATAATCAAGCTTATAATATTGGCTTGAATTTACTGCAAGAGCAATATGAAACAAACAAAGATTCACCTCCCAAAGAAA GAAAGTGGGAAAAATCAAGCGAGTTAGACAAAGCGATTAAACACCACTTGAACACTAGGGGGTTAAGCTTTAGTAGTGTA ATAGCCCAACAATCACGCATGAATGTTGAAAGGGCTTTAAAAGATGCTTTTAAAGTTAAAAACAGAGGCTTTCCTAAATT CAAGAACTCTAAATCCGCTAAACAATCTTTTTCGTGGAACAATCAAGGTTTCTCTATTAAAGAGAGCGATGAGGAACGCT TCAAGATATTCACTTTAATGAAAATGCCCTTAATGATGCGCATGCATAGAAACTTCCCTCCTCATTCTAAAGTGAAACAA ATTGTGATTTCTTGCAGACATAGAAAGTATTTTGTTAGCTTTAACGTGGAATACGAACAAGACATTATTCCCATCAAAAA CCCTAAAAATGGTGTGGGGCTAGATTTGAATATCCTTGATATAGCTTGTTCTTGTGGCGTGAATAATCACAAAAAACTAA CGGACTTTAAGCGATACTCAACAGACATGAAAGAATTACTAGGGATAGAAATAGATGAAGAGTTGGACACTAAATTACTC ATCCCTACTTATTCCAAATTGTATTCTTTAAAAAAACACTCTAAAAAATTTAAAAGATTGCAAAGAAAACAAAGCCGTAG GGTGTTAAAGTCTAAACAAAACAAAACCAAATTAGGAGGTAATTTTTACAAAACGCAAAAGAAATTAAACCAAGTCTTTG ACAAGTCTAGTCATCAAAAAACAGACAGATACCATAAAATCACAAGCGAACTTTCAAAGCAATTTGAATTGATAGTAGTT GAAGATTTGCAAGTAAAAAACATGACTAAAAGAGCTAAACTCAAAAACGTTAAACAAAAGAGTGGGCTTAATCAATCTAT CTTAAATACTTCATTCTATCAAATCATCTCTTTTTCAAATCATCTCTTTTTTAGACTACAAACAACAGCATAA Protein sequence : MKVNKGFKFRLYPTKEQQDKLQHCFFVYNQAYNIGLNLLQEQYETNKDSPPKERKWEKSSELDKAIKHHLNTRGLSFSSV IAQQSRMNVERALKDAFKVKNRGFPKFKNSKSAKQSFSWNNQGFSIKESDEERFKIFTLMKMPLMMRMHRNFPPHSKVKQ IVISCRHRKYFVSFNVEYEQDIIPIKNPKNGVGLDLNILDIACSCGVNNHKKLTDFKRYSTDMKELLGIEIDEELDTKLL IPTYSKLYSLKKHSKKFKRLQRKQSRRVLKSKQNKTKLGGNFYKTQKKLNQVFDKSSHQKTDRYHKITSELSKQFELIVV EDLQVKNMTKRAKLKNVKQKSGLNQSILNTSFYQIISFSNHLFFRLQTTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | CAJ31329.1 | insertion sequence IS606 transposase homolog A | Not tested | cag PAI | Protein | 1e-142 | 96 |
| tnpB | AAR03857.1 | transposase B-like protein | Not tested | cag PAI | Protein | 4e-137 | 94 |
