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Name : HPIN_04345 (HPIN_04345) Accession : YP_005782176.1 Strain : Helicobacter pylori India7 Genome accession: NC_017372 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 881872 - 883317 bp Length : 1446 bp Strand : + Note : COG0174 Glutamine synthetase DNA sequence : ATGATAGTAAGAACTCAAAATAGTGAAAGCAAGATCAAAGAATTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCACATCGCTTATTCTTTTGGGGCTTTAACGCATGGCATGTTTA AAGAGGGGATTCCTTTTGATGCGAGTTGTTTTAAAGGCTGGCAAGGTATTGAACACTCTGATATGATTTTAACCCCCGAT TTGGTGCGTTATTTCATTGATCCTTTTAGCGCGGATGTGAGCGTGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAGAAATGCCCTAGAAGTATCGCTAAAAAAGCCTTACAGCATTTAAAAGATTCAGGTTTGGGCGATGTGG CTTATTTTGGCGCGGAGAGCGAATTTTTCATCTTTGATTCCATTAAGATTAAAGACGCTTCCAACTCACAATACTACGAA GTGGATAGCGAAGAGGGCGAATGGAATCGGGATAAAAGCTTTGAAAATGGCGTCAATTTTGGGCATAGACCGGGCAAGCA AGGGGGCTATATGCCTGTACCGCCAACGGATACGATGATGGATATTCGCACAGAAATCGTGAAAGTCTTAAACCAAGTGG GGCTAGAAACTTTTGTCGTTCATCATGAAGTCGCGCAAGCACAAGGCGAGGTGGGTGTGAAATTTGGGGATTTAGTGGAA GCCGCTGATAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGGAAAACCGCCACTTTCATGCC AAAACCTCTATATGGGGATAACGGGAGCGGGATGCACACCCATGTGAGCGTTTGGAAAAACAACGAAAACCTTTTTAGCG GCGAAACTTACAAGGGCTTGAGCGAGTTAGCGTTGCATTTTTTAGGGGGCGTGTTGCGCCACGCTAGAGGGTTAGCCGCT TTCACTAACGCTTCCACCAATTCTTACAAACGCCTAATTCCTGGCTATGAAGCCCCATCTATTTTAACTTATTCGGCTAA TAACAGGAGCGCGAGCGTGCGTATTCCTTATGGGATTTCTAAAAATAGTGCTAGGTTTGAATTCAGATTCCCGGACAGCT CATCAAACCCCTACTTGGCTTTTTCAGCGATTTTAATGGCGGGTATGGATGGCGTTAAAAATAAGATTGATCCCGGCGAA GCGATGGATATTAACCTTTTCAAATTGACTTTAGATGAAATCAGAGAAAAGGGTATCAAACAAATGCCCCACACTTTAAG GAGATCGTTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAGAGTCAGGTCTTTAGCGAAGAATTTATTCAAGCCT ATCAGTCTCTTAAATTCAACGCTGAAGTGTTCCCATGGGAGAGCAAACCCCATCCTTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MIVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHGMFKEGIPFDASCFKGWQGIEHSDMILTPD LVRYFIDPFSADVSVVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGDVAYFGAESEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDKSFENGVNFGHRPGKQGGYMPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSVWKNNENLFSGETYKGLSELALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSANNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFSAILMAGMDGVKNKIDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKESQVFSEEFIQAYQSLKFNAEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPIN_04345 | YP_005782176.1 | glutamine synthetase | VFG1399 | Protein | 3e-89 | 45 |
