|
Name : HPIN_04295 (HPIN_04295) Accession : YP_005782168.1 Strain : Helicobacter pylori India7 Genome accession: NC_017372 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein Epsilon Function : - COG functional category : - COG ID : - EC number : - Position : 873432 - 873833 bp Length : 402 bp Strand : - Note : COG0551 Zn-finger domain associated with topoisomerase type I DNA sequence : TTGTTATTCACTGCATGGCCCACACAAGCGGTCTATAAAATGATACAAAGAGAATCGAATAGTGTTTCATTTTATGGTTA CTCTAATTATGTAAATAAAGGCGGCTGTAAGGGCGTTTTACGAGAAATAAATGGCTCAATGAAAATGGTCTGCTTGGCTA GTGTAAAAGCTAATATTAAAGAAAATTCTTTTTTCTTAGGGTGTAAAAATTATCTTAAGTGCAAATGGATTGCTAGCGTG GATTCACAAGATCCTAAATATCCCAAATGCAATGGATTGATGAAAAGAAAAAAGAATTTCAAAAACAATGAGTTTTTTAC AGCTACATCGCTTACCTTAAATGCAATGGAATATGGAATTTTGTCTCTATACCAATCTGAAAAAAAGGAAACTAATGTTT AG Protein sequence : MLFTAWPTQAVYKMIQRESNSVSFYGYSNYVNKGGCKGVLREINGSMKMVCLASVKANIKENSFFLGCKNYLKCKWIASV DSQDPKYPKCNGLMKRKKNFKNNEFFTATSLTLNAMEYGILSLYQSEKKETNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cag-epsilon | AAF80192.1 | Cag-epsilon | Virulence | cag PAI | Protein | 2e-36 | 91 |
| hp0521 | AAR07061.1 | cag 2 | Virulence | cag PAI | Protein | 2e-36 | 91 |
| hp0521 | AAR07062.1 | cag 2 | Virulence | cag PAI | Protein | 4e-35 | 90 |
| hp0521 | AAR07065.1 | cag 2 | Virulence | cag PAI | Protein | 3e-33 | 90 |
| hp0521 | AAR07066.1 | cag 2 | Virulence | cag PAI | Protein | 2e-35 | 89 |
| hp0521 | AAR07063.1 | cag 2 | Virulence | cag PAI | Protein | 2e-33 | 85 |
| hp0521 | AAR07056.1 | cag 2 | Virulence | cag PAI | Protein | 1e-32 | 84 |
| hp0521 | AAR07057.1 | cag 2 | Virulence | cag PAI | Protein | 1e-32 | 84 |
| hp0521 | AAR07058.1 | cag 2 | Virulence | cag PAI | Protein | 1e-32 | 84 |
| hp0521 | AAR07059.1 | cag 2 | Virulence | cag PAI | Protein | 1e-31 | 83 |
| hp0521 | AAR07067.1 | cag 2 | Virulence | cag PAI | Protein | 1e-30 | 81 |
| hp0521 | AAR07060.1 | cag 2 | Virulence | cag PAI | Protein | 8e-31 | 80 |
