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Name : HPIN_04260 (HPIN_04260) Accession : YP_005782161.1 Strain : Helicobacter pylori India7 Genome accession: NC_017372 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein (cag7) Function : - COG functional category : - COG ID : - EC number : - Position : 862073 - 867352 bp Length : 5280 bp Strand : + Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGAATGAAGAAAACGATAAACTTGAAACTTCTCAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGC GACAGAAGCCAATCATTTTGAAGATTCTTCAAAAGAATCCAAAGAAAGCTCAGATCATCATCTTGACAACCCCACAGAAA CTAAAACCCATTTTGATGAATACGAGTTAGAAGAAACCCAAACTCAAATAGATTCTGGAGGTAATGAAACTTCAGAATCT AGCGATGGCAGTCTAGCAGACAAGTTATTCAAAAAAGCCAGGAAATTAGTTGATAATAAAAGACCTTTCACTCAGCAAAA AAATTTAGATGAAGAAACCCAAGAACTGAACGAAGAAGACGATCAAGGAAATAATGGGTATCAAGAAGAAACTCAAATAG ACTTAATTGATGATGAAACTTCTCAAAAAACCCAACAACATTCACCCCAAGATTTATCCAATGAAGAAGCGACAGAAGCC AATCATTTTGAAGATTCTTCAAAAGAATCCAAAGAAAGCTCAGATCATCATCTTGACAACTACACAGAAACTGAAATCAA TTTTGATGGAGACAAGTCAGAAGAAATAACTAACGACTCTAACGATCAAGAGATTATCAAAGGAAGCAAAAAGAAATACA TTATTGGTGGCATTGTAGTCGCTGTTCTTATCGTGATTATTTTATTTTCTAGAAGCATTTTTCACTACTTCATGCCTTTG GAAGATAAAAGCTCTCGTTTTAGCAAAGACAGGAATCTTTATGTCAATGATGAAATCCAAATAAGGCAAGAGTATAACCG ATTGCTGAAAGAACGGAATGAAAAAGGCAATATGATCGATAAGAATCTTTTCTTCAATGACGATCCCAATAGAACCTTAT ACAACTATTTGAATATTGCAGAAATTGAGGACAAAAATCCGTTGAGAGCCTTTTATGAATGTATCAGTAATGGCGGCAAC TATGAAGAATGTTTGAAGCTTATCAAAGACAAAAAACTTCAAGATCAAATGAAAAAGACTCTAGAGGCTTATAATGACTG CATCAAAAATGCCAAAACTGAAGAAGAAAGGATCAAGTGTTTAGATTTAATCAAAGATGAAAACCTGAAAAAAAGCTTAC TGAACCAACAAAAAGTTCAAGTGGCACTAGATTGTTTGAAAAACGCTAAAACCGATGAAGAACGAAACGAGTGCCTAAAA CTCATCAATGACCCTGAGATCAGAGAGAAATTCCGTAAGGAATTAGGGCTTCAAAAAGAGCTTCAAGAGTATAAGGATTG TATCAAAAACGCCAAAACAGAAGCTGAGAAAAACGAATGCTTGAAAGGCTTGTCTAAAGAAGCTATAGAAAGATTGAAAC AGCAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGATGAAGAACGAAACGAGTGCTTGAAAAATATTCCCCAAGACTTG CAAAAAGAACTACTAGCTGATATGAGCGTTAAGGCTTACAAGGATTGCATATCAAAAGCTAGGAATGAAAAAGAGAAAAA AGAATGCGAGAAATTGCTCACGCCTGAAGCGAAAAAAAAGTTAGAACAACAGGTTCTAGATTGTTTGAAAAACGCTAAAA CCGATGAAGAACGAAAAAAGTGTTTGAAAGATCTCCCTAAAGACTTACAAAGCGATATCTTAGCCAAAGAGAGCCTGAAA GCTTATAAAGACTGCGTATCTCAAGCCAGAACTGAAGCTGAGAAAAAAGAATGCGAGAAACTACTCACCCCTGAAGCGAA AAAACTTTTAGAAGAAGAAGCCAAAGAAAGCGTTAAGGCTTACTTGGATTGCGTATCTCAAGCCAAAAACGAAGCTGAGA AAAAAGAATGCGAGAAACTACTCACCCCTGAAGCGAAAAAAAAGTTAGAAGAAGCTAAAAAAAGCGTTAAGGCTTATTTG GATTGTGCATCTCAAGCCAGAACTGAAGCTGAGAAAAAAGAATGCGAAAAATTACTCACGCCTGAAGCGAGAAAACTTTT AGAGCAACAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGATGAAGAACGAAAAAAGTGTTTGAAAGATCTCCCTAAAG ACTTGCAGAAAAAGGTTTTAGCCAAAGAAAGCGTTAAGGCTTATTTGGACTGCGTATCTCAAGCCAAAACTGAAGCTGAG AAAAAAGAATGCGAGAAATTACTCACCCCTGAAGCGAGGAAACTCTTAGAAGAGGCTAAAGAGAGTCTTAAAGCTTATAA AGACTGCGTATCAAGAGCTAGGAATAAAAAAGAGAAAAAAGAATGCGAGAAATTGCTCACGCCTGAAGCGAAAAAACTTT TAGAAGAAGAGGCTAAAGAGAGCGTTAAGGCTTACTTGGATTGCGTATCTCAAGCCAAAAACGAAGCTGAGAAAAAAGAA TGCGAAAAATTGCTCACCCCTGAAGCGAAAAAAAAGTTAGAAGAAGCTAAAAAAAGCGTTAAGGCTTACTTGGATTGCGT ATCAAAAGCCAGAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTACTCACCCCTGAAGCGAAAAAACTTTTAGAGCAAC AAGCGCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGATAAAAAAAGGTGTGTCAAAGATCTCCCCAAAGACTTACAG AAAAAGGTTTTAGCTAAAGAGAGCCTGAAAGCTTATAAAGACTGCGTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGA ATGCGAGAAATTACTCACCCCTGAAGCGAAAAAACTTTTAGAAGAGGCTAAAGAGAGTCTTAAAGCTTATAAAGACTGCG TATCTCAAGCTAGAAATGAAAAAGAGAAAAAAGAATGCGAGAAACTACTCACCCCTGAAGCGAAAAAACTTTTAGAGCAA CAAGCACTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGAGAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTGCA GAAAAAGGTTTTAGCCAAAGAGAGTGTTAAGGCTTATTTGGACTGCGTTTCAAAAGCTAGGAATGAAAAAGAGAAAAAAG AATGCGAGAAATTACTCACCCCTGAAGCGAAAAAACTTTTAGAAGAAGCCAAAGAGAGCCTGAAAGCTTATAAAGACTGC CTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAATTGCTCACCCCTGAAGCGAGAAAACTCTTAGAGCA AGAAGTTAAGAAGAGCGTTAAGGCTTATTTGGACTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAACAAGAATGCGAGA AATTACTCACCCCTGAAGCGAGAAAATTTTTAGCGAAGCAAGTGCTAAATTGTTTGGAAAAAGCTGGAAATGAAGAAGAA AGAAAAGCATGTCTTAAAAATCTCCCTAAAGACTTACAGGAAAATGTTTTAGCCAAAGAGAGTCTTAAAGCTTATAAAGA CTGCCTCTCTCAAGCTAGAAATGAAGAAGAAAGGAGAGCTTGCGAGAAATTACTCACCCCTGAAGCGAGGAAACTCTTAG AACAAGAAGTTAAGAAGAGCGTTAAGGCTTATTTGGATTGCGTATCAAAAGCTAGGAATGAAAAAGAGAAACAAGAATGC GAGAAATTGCTCACGCCTGAAGCGAGAAAATTCTTAGCGAAAGAACTCCAACAAAAAGATAAAGCGATCAAAGATTGCTT GAAAAACGCCGATCCTAACGACAGAGCGGCCATTATGAAGTGTTTGGATGGTTTGAGCGATGAAGAGAAGCTCAAATACC TGCAAGAAGCTAGAGAAAAGGCTGTCTTGGATTGTTTGAAAACGGCTAGGACCGATGAAGAAAAAAGGAAATGCCAAAAC CTTTATAGCGATTTGATTCAAGAAATCCAAAATAAAAGGACACAAAATAAACAAAATCAATTGAGTAAAACAGAAAGATT GCATCAAGCAAGCGAGTGCTTGGATAACTTAGATGACCCTACTGATGAGCAAGCCATAGAGCAATGTTTAGAGGGCTTGA GCGATAGTGAAAGGGCGCTAATTCTAGGAATTAAACGACAAGCTGATGAAGTGGATCTGATTTATAGCGATCTAAGAAAC CGCAAAACCTTTGATAACATGGCGGCTAAAGGTTATCCGTTGTTGCCAATGGATTTCAAAAATGGCGGCGATATTGCCAC TATTAACGCTACTAATGTTGATGCGGACAAAATAGCTAGTGATAACCCTATTTATGCTTCCATAGAGCCTGACATTACCA AGCAATATGAAACAGAAAAAACCATTAAGGATAAGAATTTAGAAGCTAAATTAGCTAAGGCTTTAGGTGGTAATAAAAAA GATGACGATAAAGAAAAAAGTAAAAAATCTGCCACAGAAGCTAAAACAGAAAGCAATAAAATAGACAAAGATGTCGCAGA AACTGCCAAGAATATCAGTGAAATCGCTCTTAAGAACAAAAAAGAAAAGAATGGGGAATTTGTAGATGAAAATGGTAATC CCATTGATGACAAAAAGAAAGCAGAAAAACAAGATGAAACAAGCCCTGTCAAACAGGCCTTTATAGGCAAGAGTGATCCC ACATTTGTTTTAGCGCAATACACCCCTATTGAAATCACTCTGACTTCTAAAGTAGATGCCACTCTCACAGGTATAGTGAG TGGGGTTGTAGCCAAAGATGTATGGAACATGAACGGCACTATGATCTTACTAGACAAAGGCACTAAGGTGTATGGGAATT ATCAAAGCGTGAAAGGTGGCACACCTATTATGACACGCTTAATGATAGTCTTTACTAAAGCCATTACGCCTGATGGTGTG ATAATACCTCTAGCAAACGCTCAAGCAGCAGGCATGCTGGGTGAAGCAGGGGTAGATGGCTATGTGAATAATCACTTTAT GAAGCGCATAGGCTTTGCTGTGATAGCAAGCGTGGTTAATAGCTTCTTGCAAACTGCGCCTATCATAGCTCTAGATAAAC TCATAGGCCTTGGCAAAGGCAGAAGTGAAAGGACACCTGAATTTAATTACGCTTTGGGTCAAGCTATCAATGGTAGTATG CAAAGTTCAGCTCAAATGTCTAATCAAATTCTAGGGCAACTGATGAATATCCCCCCAAGTTTTTACAAAAACGAGGGCGA TAGTATTAAGATTCTCACAATGGACGATATTGATTTTAGCGGCGTGTATGATGTTAAAATTACCAACAAATCTGTGGTAG ATGAAATCATCAAACAAAGCACTAAAACTTTGTCTAGAGAACATGAAGAAATCACCACAAGCCCCAAAGGTGGCAATTAA Protein sequence : MNEENDKLETSQKTQQHSPQDLSNEEATEANHFEDSSKESKESSDHHLDNPTETKTHFDEYELEETQTQIDSGGNETSES SDGSLADKLFKKARKLVDNKRPFTQQKNLDEETQELNEEDDQGNNGYQEETQIDLIDDETSQKTQQHSPQDLSNEEATEA NHFEDSSKESKESSDHHLDNYTETEINFDGDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFMPL EDKSSRFSKDRNLYVNDEIQIRQEYNRLLKERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPLRAFYECISNGGN YEECLKLIKDKKLQDQMKKTLEAYNDCIKNAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERNECLK LINDPEIREKFRKELGLQKELQEYKDCIKNAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQDL QKELLADMSVKAYKDCISKARNEKEKKECEKLLTPEAKKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESLK AYKDCVSQARTEAEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKNEAEKKECEKLLTPEAKKKLEEAKKSVKAYL DCASQARTEAEKKECEKLLTPEARKLLEQQALDCLKNAKTDEERKKCLKDLPKDLQKKVLAKESVKAYLDCVSQAKTEAE KKECEKLLTPEARKLLEEAKESLKAYKDCVSRARNKKEKKECEKLLTPEAKKLLEEEAKESVKAYLDCVSQAKNEAEKKE CEKLLTPEAKKKLEEAKKSVKAYLDCVSKARTEAEKKECEKLLTPEAKKLLEQQALDCLKNAKTEADKKRCVKDLPKDLQ KKVLAKESLKAYKDCVSRARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDCVSQARNEKEKKECEKLLTPEAKKLLEQ QALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSKARNEKEKKECEKLLTPEAKKLLEEAKESLKAYKDC LSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSRARNEKEKQECEKLLTPEARKFLAKQVLNCLEKAGNEEE RKACLKNLPKDLQENVLAKESLKAYKDCLSQARNEEERRACEKLLTPEARKLLEQEVKKSVKAYLDCVSKARNEKEKQEC EKLLTPEARKFLAKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVLDCLKTARTDEEKRKCQN LYSDLIQEIQNKRTQNKQNQLSKTERLHQASECLDNLDDPTDEQAIEQCLEGLSDSERALILGIKRQADEVDLIYSDLRN RKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIKDKNLEAKLAKALGGNKK DDDKEKSKKSATEAKTESNKIDKDVAETAKNISEIALKNKKEKNGEFVDENGNPIDDKKKAEKQDETSPVKQAFIGKSDP TFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPIMTRLMIVFTKAITPDGV IIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSERTPEFNYALGQAINGSM QSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTKTLSREHEEITTSPKGGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cagY | AGC69789.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 97 |
| HP0527 | BAD13833.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 95 |
| HP0527 | BAD13970.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 95 |
| cagY | YP_005777271.1 | cag pathogenicity island protein Y VirB10-like protein | Virulence | cag PAI | Protein | 0.0 | 95 |
| HP0527 | BAD14052.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 95 |
| cagY | AGC69792.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 95 |
| HP0527 | BAD13998.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 94 |
| cagY | YP_005774542.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 94 |
| HP0527 | NP_207323.1 | cag pathogenicity island protein (cag7) | Virulence | cag PAI | Protein | 0.0 | 94 |
| HP0527 | BAD14026.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 93 |
| cag-Y | AAF80198.1 | Cag-Y | Virulence | cag PAI | Protein | 0.0 | 90 |
| HP0527 | BAD13888.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 90 |
| cagY | AGC69787.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 89 |
| HP0527 | BAD13779.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 86 |
| cagY | YP_005779063.1 | cag island protein | Virulence | cag PAI | Protein | 0.0 | 86 |
| cagY | AGC69786.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 86 |
| HP0527 | BAD13915.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 85 |
| HP0527 | BAD13806.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 85 |
| HP0527 | BAD13860.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| cagY | YP_005775730.1 | cag pathogenicity island protein Y VirB10-like protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| orf13/14 | NP_223194.1 | cag island protein | Virulence | cag PAI | Protein | 0.0 | 82 |
| HP0527 | BAD13943.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 80 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPIN_04260 | YP_005782161.1 | cag pathogenicity island protein (cag7) | VFG0287 | Protein | 0.0 | 94 |
