Gene Information

Name : HPIN_03835 (HPIN_03835)
Accession : YP_005782080.1
Strain : Helicobacter pylori India7
Genome accession: NC_017372
Putative virulence/resistance : Virulence
Product : VirB11 type IV secretion ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 784638 - 785582 bp
Length : 945 bp
Strand : -
Note : COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

DNA sequence : 
ATGGACTTAGACAAACTCAAAGATTATAGGGCTTTAAGAAGTGCTATTTTAAGGCTCTTGCCTTATTTAGATAGCGGTAT
TACAGAGCTGATTATGAATAAAGAAAAAGAAATTTGGCTCTATAAGCTTAATGGAACTAGAGAAAAAGTCTTTGATGAAA
ATTTAGACAAAGCCTTTATTCTGGGGTTTGGGGAACAATTAGCGAGTTTTAGAGATTTGTTTTTTAATGCTAATTACCCC
ACCCTTAATACTTCCATTCCTACTTCTAGATATAGAGTGAGCATGAACCACTTTGCTATTAGTGCGGATAATGAATTGAG
TTTGAATATTAGAGTGCCAAGTGATAAAAAGTTTGATTTAAAAGCTTTCAAGCTTTCTAGTATCTGTCAATACGATTATG
AGTATTTACAAAAGCTGATGATTGAGGGAAAGAACTTGCTTATTAGTGGAGGCACAGGCAGTGGTAAAACAAGCTTTTTA
AACGCTTTGATTGAATTTATCCCTAAACACACACGAATAGTGAGTGTAGAAGATAGCGAAGAATTAGATTTAAGAGCGTT
TGAAAATCATAAATCCTTGTTAGTGGATAAGACCGAAAGCTCTAAATTTACCTATGAAAACGCCTTGAATATGGCAATGA
GAATGAGTCCTGATAGGCTTATGGTAGGTGAGATTGACACACGAAATGCTATGCTTTTTTTAAGATTTGGCAATACAGGG
CATAAAGGCATGGTTTCTACTTTACATGCAGATAGCGTGCATGGGGTCATAGAGGCGATTGCTTTAAATCTACAGATGAA
TAAAAGTGGTTTAGATGTAAAAGTAGCTAGAAAATTCTTTGAAAGCAGTGTGGATATAGTCGTTCAAATTGTGCTTGATA
AAGCCACTAACACTAGATATATCCAAGAAATCTTACCAACCAAAGAATTAAGAAGTAGCCTATGA

Protein sequence : 
MDLDKLKDYRALRSAILRLLPYLDSGITELIMNKEKEIWLYKLNGTREKVFDENLDKAFILGFGEQLASFRDLFFNANYP
TLNTSIPTSRYRVSMNHFAISADNELSLNIRVPSDKKFDLKAFKLSSICQYDYEYLQKLMIEGKNLLISGGTGSGKTSFL
NALIEFIPKHTRIVSVEDSEELDLRAFENHKSLLVDKTESSKFTYENALNMAMRMSPDRLMVGEIDTRNAMLFLRFGNTG
HKGMVSTLHADSVHGVIEAIALNLQMNKSGLDVKVARKFFESSVDIVVQIVLDKATNTRYIQEILPTKELRSSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 1e-51 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPIN_03835 YP_005782080.1 VirB11 type IV secretion ATPase VFG1979 Protein 1e-40 41