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Name : HPIN_03825 (HPIN_03825) Accession : YP_005782078.1 Strain : Helicobacter pylori India7 Genome accession: NC_017372 Putative virulence/resistance : Virulence Product : VirD4 coupling protein Function : - COG functional category : - COG ID : - EC number : - Position : 781874 - 784126 bp Length : 2253 bp Strand : - Note : COG3505 Type IV secretory pathway, VirD4 components DNA sequence : ATGAAAATGCAATTTGTGAAAGCCTTTTGTGTGCTCTTTAGTATTTTACTTATCCCCTTATTTTTTATCTTGGCAAATTA TTACACTTTTGATGCCTTAAAGTCGTTTAGACAGGCTTATTTTTTCTCTCAAAGTGTGTTTGTAGGGCTTTATAAGGGAG CGAGTATCTTAGATTTAAAATTTGAAGTCTATATCACTATGCTTATTTCTTTAATGCCTTTAATGGCTACAATTTACATT AGTTTTCCAAAGACTAAAGAAACTTCACATGGCTATGCGAGATGGGCTAATAGCAAAGATATAGAATGTTTTAAAATTTT TAGTAAAGAGGGCTTTTGTAAGGTAGTCCATAGATTAGGGGTGCAATTTGATAATGGCTTTATTCTAGGAAAATTTGGTT TTCCAAAACTTAGAGATGTGTGTTATGACAAGCCTTTAGGAGCAATGATTGTTGCACCACCCGGAGCTGGTAAAACCGCA TGTGTGGCTTTACCAAATCTATTGACTTTGCCTAATAGCTGTATTATCACCGATATTAAAGGCGAATTAAGAGATAAGAC CGCAGGGTATAGGCAAAAATTCTTAAACAATAGGATTTTAATCTTTAATCCTTATGGTGATGATAACACTTGCTATTTTA ATCCTTTTGATAAAAGGATTGTAAAACCCATGAACTTTGACCAACGCCTAAGGCTTGTTCAAGAAAATGCTAATAATGTC TTTATTAGCGAAGAAAAAGGCGAAGACCATTGGGTATCTAAAGCTAAAGATTTGTTTAGTTTTTACGCCTTGTATGATGT TTGTTCCAAAGATGAAACAAACTTTTTTGATGTCGCTATGGGTCCAAATAGAGATTATGTTAATTTGATTGACAAAAGAA GCCGTTATTACAAACAACTCTATCAACACGATAAAAAAACAGGCGAAATTATCCTAGACCCACAAACTAATGAGCCTATT TTAATCCCTAATGTGAATGCGAGAAAATTGTGGTATTTGCAAGTTTCAGAGCAAAAATACGCCGACCCCAAAGACCCTAG AAATTTTGACCCAAATGAACCTGAACCAACTCCTAGAAGTGAAGAGGCATTAGATGAAATTGTAAGAAATGATGCAAGAG CTTGGGCTAATAGTGCTGAAGAAGAATTTGCAAGTATCATTTCTACCTTTAATCGCTTTGTGTCTGTTTTTAAGAGCAAT CAAGTAAGAGTAGCTACTTCTAAAATGAGCTTTAATTATGAAGAATTAAGAACGGACAATATTAGTCTTTATATTGTTAT TGCTCAAAAAGATATTAACACGCTTGCTCCCTTAGTTAGAGTGATTTTAGAAAGCATTGCTAAAAACTTATTAACTAATG AAAGCTCTAAAAAAGAAGAACGCATTTATATGATTTTAGATGAATTTGTTAGATTTGGTAAGTTGCCTTTCTTATTAGAA ATGCCAGCATTGTGTCGTTCTTATAATGTTGTCCCCTTATTCATCACACAAGATTATGCGATGATTAGAAAATATTATAG CGATGATGATTTGAAAATCTTAAAAGGCGTGGTGCATTATAACATTGTCTTTAAGATGAATAGCGCTGAAGATGCTGAGA TTGTCTCTAAGGAAGTGGGCGAATTTACTAGACAATCTAAAAACTATTCTACTGAAAAAAATCAATTAGTTTTTGGAGGT AGTTCTTCTTATAGCCATGAGGGTAGAAACTTACTCACAGCCCAAGACATTATGAATATAGAATCAGATGAAGTTATTGT AATTATTACAGGGGCTAAAGCGACCCCTTTAAAACTTAAGGCTAATTATTGGTTCAAAGATAAAGAGCTTTTAAAAAGAG CTAATTTGCCTATTGATTTAGAAGTAGAAAGAAAAAGAGTTGAAGAACCTACGCAACCCACTACAGAAATTACAACGCCC CCTAATCAAAACAAAGCTGACTTAGAACCAAGTAATAAGGGGGAATATACAGAAAATGAAAGTAGTGAAAGTAACAATGA GAATAATCCCACTATACCACAAAAAGAGAGTGAAAATTCAAACCCAACAGAAAGCGAGAAAGACCATGAAAGTCCCATTA CCTTAGAAAATGCTAATGAAAATATAGAGCAAGGAAATCACAATGAAATTGATGAGATTTTAAAAAAGCCACTGAGTGAA ATCAGTATGGAAGAGAAAAGAGCCTTGTTTAAGAAAATGCAACAAGGCGATGAAGAAAGCGAACAAGAAGTTCTACAAGA CACCCAAAGTTAA Protein sequence : MKMQFVKAFCVLFSILLIPLFFILANYYTFDALKSFRQAYFFSQSVFVGLYKGASILDLKFEVYITMLISLMPLMATIYI SFPKTKETSHGYARWANSKDIECFKIFSKEGFCKVVHRLGVQFDNGFILGKFGFPKLRDVCYDKPLGAMIVAPPGAGKTA CVALPNLLTLPNSCIITDIKGELRDKTAGYRQKFLNNRILIFNPYGDDNTCYFNPFDKRIVKPMNFDQRLRLVQENANNV FISEEKGEDHWVSKAKDLFSFYALYDVCSKDETNFFDVAMGPNRDYVNLIDKRSRYYKQLYQHDKKTGEIILDPQTNEPI LIPNVNARKLWYLQVSEQKYADPKDPRNFDPNEPEPTPRSEEALDEIVRNDARAWANSAEEEFASIISTFNRFVSVFKSN QVRVATSKMSFNYEELRTDNISLYIVIAQKDINTLAPLVRVILESIAKNLLTNESSKKEERIYMILDEFVRFGKLPFLLE MPALCRSYNVVPLFITQDYAMIRKYYSDDDLKILKGVVHYNIVFKMNSAEDAEIVSKEVGEFTRQSKNYSTEKNQLVFGG SSSYSHEGRNLLTAQDIMNIESDEVIVIITGAKATPLKLKANYWFKDKELLKRANLPIDLEVERKRVEEPTQPTTEITTP PNQNKADLEPSNKGEYTENESSESNNENNPTIPQKESENSNPTESEKDHESPITLENANENIEQGNHNEIDEILKKPLSE ISMEEKRALFKKMQQGDEESEQEVLQDTQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virD4-1 | YP_002301090.1 | VirD4 coupling protein | Virulence | cag PAI | Protein | 3e-131 | 53 |
